Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20cuniculi_20[genbank_20GCA_5F001264635.1_202015-08-11] 76 sequences; 7,459,907 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq40 185 2e-41 seq2 149 1e-30 seq58 134 3e-26 seq39 134 3e-26 seq63 113 8e-20 >seq40 Length=46956 Score = 185 bits (204), Expect = 2e-41 Identities = 578/873 (66%), Gaps = 39/873 (4%) Strand=Plus/Minus Query 9963 ACCCGGCGCTCGAAGAAGTTGGACTTGCCCTCGAGGGAAATGAGCTCCATGAAGTCAAAG 10022 ||||| |||||||| ||||| |||||||||| || |||||| |||||| ||||| || Sbjct 42446 ACCCGACGCTCGAAAAAGTTCGACTTGCCCTGCAGCGAAATGTTCTCCATAAAGTCGAAT 42387 Query 10023 GGGTTCTCGGCGCCAAACTGCTTGGGGTAACCGAGTGCTGTGAAAATGCGGTCAGCCACG 10082 ||||||| ||| | ||||| |||| ||||| || | | ||||| || || Sbjct 42386 GGGTTCTTTGCGTGGTAGTGCTTCGGGTTCCCGAGCGCCACCAGCAGCCGGTCTGCGACA 42327 Query 10083 AACTCGATGTACTGGCTCATCAGGTCCGAGTTCATGCCAATCATGCGGCAGGGGATG-GC 10141 ||||| |||||||||| |||||| || ||||||||| |||| ||| || || | || Sbjct 42326 AACTCAATGTACTGGCACATCAGCCGCGCGTTCATGCCGATCA-GCGACACCGGCAGCGC 42268 Query 10142 GTCGCAAATGAAGTCCTTTTCGTTGGCGACCGCTTCCTCGACGATGCTCTTTACCA-CGT 10200 ||| | | ||||||| || | | || || |||| |||| || | | ||| Sbjct 42267 GTCCGACAAAAAGTCCTGCTCAATCTCCACGGC---CTCGGTGATGATCGCCTCGATCGT 42211 Query 10201 CAAGGGA-----CAGCTTGTTCTCGAGCTTCGAATACAGGAGCTCTCCAAACTGCTGGTG 10255 ||| | |||| ||| | | | ||| ||| || | |||| | ||| Sbjct 42210 GCTGGGGTGCGCCCGCTTCTTCAGGTGGCT-GAA--CAGCAGGCATGCAAAGTCAGTGTG 42154 Query 10256 GAGGCCCTCGTCGCGGCTGATGAACTCGTTGGACAAACCCAGACCGGGCATGAGCCCCCG 10315 || |||||||| || ||| | |||||| || || |||||| ||||| || || || Sbjct 42153 CAGTCCCTCGTCCCGCGAGATCAGCTCGTTCGAGAACGACAGACCAGGCATCAGGCCACG 42094 Query 10316 GTTGCGCAGCCAGAAAATGG-CGCAGAACGACCCGGAGAACAGAAGA--CCCTCCACGCA 10372 || |||||| || || | |||| ||||| ||||| || ||||| ||||||||| Sbjct 42093 CTTCTTCAGCCAAAAGATCGACGCA-AACGATCCGGAAAA--GAAGATGCCCTCCACGGC 42037 Query 10373 CACCCAGGCGACGAGGCGCTCTGCGAAG---GAGCGGTCGCGCGAAAAGTATTTCG-AG- 10427 | | | || || |||||||| | |||| | |||| || || | | || || Sbjct 42036 CGCGAACGCCACCAGGCGCTCCGAGAAGCTCGCGCGG-CGGTCGTTGA-TCCACCGCAGC 41979 Query 10428 GCCCACGCTGCCTTCTTTCCCACGGCAGGGATCGTCTCGATAGCCTCGAAGAGCTTGTTA 10487 |||||| | |||||||| ||| | |||||||||||||| || || || || | | Sbjct 41978 GCCCACTCCGCCTTCTTCTTCACCACCGGGATCGTCTCGATCGCGTCAAACAGGTACTCG 41919 Query 10488 CGCT---CGGTCTCGTCCTCAATAAGAGCATCAAGGAGCAGGGAGTATTGCTCGCTGTGG 10544 |||| ||| |||| | ||| | | || | ||||| ||||| ||| |||| Sbjct 41918 CGCTGCTCGGGCTCG-CGGATATACGTG--TCGATCAGCAGCGAGTACGTCTCCGAGTGG 41862 Query 10545 ACGCTCTCATTGTACCCCTGGTAAGCGTAGAACATACGTGCCGAGGGGTCCGTGACTTCC 10604 | |||| | |||| | ||||||| || ||| || | || || || Sbjct 41861 ATATTCTCCATCATGATCTGGAAGCCGTAGAAGCAGCGCGCCTCGGCGGCCTGCACCTCG 41802 Query 10605 TCGGCAAAGTTGTTGTTCAGGTTCTCCATCACCATGCCATCGCTGCCTGCAAAGAAGCCG 10664 | ||| | ||||||||| |||| ||||| || | |||||||| | Sbjct 41801 GTCGAGAAGCGCTCCAGCAGGTTCTCGTTCACAATGCCGTCCGACGCGGCAAAGAACGCC 41742 Query 10665 AGGATGTGCTTGATGAAGTGGCGCTCATCATCGTTCAGT---TTTTCACGCCAGTCTACC 10721 || | || |||| ||||||||||||| |||||||| || || |||||| | Sbjct 41741 AGCACATGGCTGATAAAGTGGCGCTCATTGTCGTTCAGCCGGTTGTC---CCAGTCGTGC 41685 Query 10722 ACATCCTGGTTGAGCTGGACCTCCTCCACGGTCCAGAAAGTGGCAACGGCCTTCTTGTAC 10781 | |||| | | || | || |||||| |||||||||| | || ||||||||||||| Sbjct 41684 AGGTCCTTGCTCAGGTCGATCTCCTCGGCGGTCCAGAACGACGCCTCGGCCTTCTTGTAG 41625 Query 10782 ATCTGGAAAATGTCGGGGTACCGGATGGGGAAC 10814 | ||| | || ||| |||||||||| |||||| Sbjct 41624 AACTGCCAGATCTCGTGGTACCGGATCGGGAAC 41592 >seq2 Length=94478 Score = 149 bits (164), Expect = 1e-30 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || |||| || | ||| || ||| ||| || |||||||| || ||| Sbjct 13078 CCACCACGCAGACGCAGCACAAGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTA 13137 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| ||||| || || || | |||||||| || || Sbjct 13138 AGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCAAAGATCAGGCGCTGTTGGTCCGGGGGG 13197 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || |||||||| || |||||| |||||||| |||||| ||||| | || || || Sbjct 13198 ATACCCTCCTTGTCCTGGATCTTTCCCTTGACGTTCTCGATAGTGTCGGAAGACTCCACC 13257 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | |||||| || || |||||||||||||||||||| | ||||| Sbjct 13258 TCAAGGGTGATAGTCTTCCCCGTGAGGGTCTTGACGAAGACTTGCAT 13304 >seq58 Length=446738 Score = 134 bits (148), Expect = 3e-26 Identities = 152/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 68258 GTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTG 68317 ||| || ||| ||| || |||||||| || ||| || || | || || || | ||| Sbjct 376243 GTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTAAGAGTGCGACCGTCCTCGAGCTG 376184 Query 68318 CTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTT 68377 ||| |||||||| || | | |||||||| || ||||| || |||||||| |||||||| Sbjct 376183 CTTGCCGGCGAAAATCAACCGCTGTTGGTCCGGAGGAATACCCTCCTTGTCCTGAATCTT 376124 Query 68378 TGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGT 68437 | ||||||| ||||| ||||| || || || || | ||||| || || ||||| Sbjct 376123 AGACTTGACGATGTCGATCGTGTCGTTCGACTCGACCTCAAGAGTGATCGTCTTGCCCGT 376064 Query 68438 GAGGGTCTTGACGAATATCTGCAT 68461 ||| ||||||||||| |||||||| Sbjct 376063 GAGTGTCTTGACGAAGATCTGCAT 376040 >seq39 Length=522589 Score = 134 bits (148), Expect = 3e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || || | || | ||| || ||| ||| || |||||||| || ||| | Sbjct 30256 CCACCACGCAGACGAAGGACAAGGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTG 30197 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || || || | |||||| ||||| || || || | |||||||| || ||| Sbjct 30196 AGCGTGCGGCCGTCCTCAAGCTGCTTGCCGGCAAAGATCAGGCGCTGTTGGTCCGGAGGA 30137 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| |||||||| || ||||| ||||||| ||||| ||||| | || || ||| Sbjct 30136 ATGCCCTCCTTGTCCTGGATCTTGCTCTTGACGTTTTCGATTGTGTCCGAGGACTCGACT 30077 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | ||||| || || || || |||||||||||||| | |||||| Sbjct 30076 TCGAGCGTGATAGTCTTGCCAGTAAGGGTCTTGACGAACACCTGCAT 30030 Score = 131 bits (144), Expect = 3e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || ||||| || || | || | || |||||| ||| || |||||||| || || Sbjct 30028 CCACCGCGGAGACGGAGCACGAGATGGAGCGTGCTCTCCTTCTGGATGTTGTAGTCACTC 29969 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || || || | |||||| ||||| || || || | |||||||| || || Sbjct 29968 AGAGTACGACCGTCCTCCAGCTGCTTACCGGCAAAGATAAGACGCTGTTGGTCCGGGGGG 29909 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || |||||||| || ||||| ||||||| ||||| ||||| | ||||| ||| Sbjct 29908 ATACCCTCCTTGTCCTGGATCTTGCTCTTGACGTTTTCGATCGTGTCAGACGATTCGACT 29849 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 |||| ||||| || || || |||||||||||||| || | |||||| Sbjct 29848 TCCAGAGTGATCGTCTTGCCAGTGAGGGTCTTGACAAAGACCTGCAT 29802 Score = 123 bits (136), Expect = 5e-23 Identities = 167/233 (72%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 68229 TAATTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAA 68288 || || || ||||| || || | || | ||| |||||| ||| || |||||||| || Sbjct 30490 TAGTTACCACCGCGGAGACGAAGGACAAGGTGGAGCGTGCTCTCCTTCTGGATGTTGTAG 30431 Query 68289 TCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCG 68348 || || || | || || || | |||||| ||||| || || || | |||||||| Sbjct 30430 TCACTCAGAGTACGGCCGTCCTCCAGCTGCTTGCCGGCAAAGATAAGACGCTGTTGGTCC 30371 Query 68349 GGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGAT 68408 || || || || |||||||| || ||||| ||||||| ||||| ||||| | || Sbjct 30370 GGGGGGATACCCTCCTTGTCCTGGATCTTGCTCTTGACGTTTTCGATCGTGTCCGAGGAC 30311 Query 68409 TCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || ||||| | ||||| || || || || ||||||||||| || | |||||| Sbjct 30310 TCAACTTCGAGCGTGATAGTCTTGCCAGTAAGGGTCTTGACAAAGACCTGCAT 30258 >seq63 Length=730213 Score = 113 bits (124), Expect = 8e-20 Identities = 660/1040 (63%), Gaps = 45/1040 (4%) Strand=Plus/Minus Query 224978 TACCGCCACTGGATGTACTGGTTGGGGGTCATGTCCAGGTGGTTCTCAATATGGTGGAAA 225037 || ||||| | ||||| | | || ||| |||||||||| | ||||| |||||||| Sbjct 515510 TAACGCCAGAGCATGTATTCGAGAGGAGTCTTGTCCAGGTGCTGGTCAATGTGGTGGAAC 515451 Query 225038 GCATGCTGGGCTACGTACGCCATGCGCATGTTGGGATGCTTCCACA-CAGAGCCCCGAGT 225096 || |||||||| ||||| | ||| || ||| || |||||||||| | | ||||||| Sbjct 515450 GCGTGCTGGGCGACGTAACCAATGACCAGGTTAGGGTGCTTCCACATCTCA--CCCGAGT 515393 Query 225097 CGGT-TGTGCCTCGCCGGTGAGGACCTTGATGAGCGTAGTCTTGCCCGCACCATTGGGGC 225155 || | | || ||| | || ||||| || || | |||||||| ||| ||||| | Sbjct 515392 TGGGCTCAGTGTCACCGACAATGAGCTTGACAAGGGTCGACTTGCCCGAACCGTTGGGAC 515333 Query 225156 CAATCACGCCAATCCGGGATGACATTGCAACCTGCGAGTTCAC-----GTTGCTGAAGAT 225210 ||| | ||| || || || | | | |||| | |||| | ||||| || Sbjct 515332 CAAGGATAGCAACACGCGACGAGAGCGAGAGCTGCATGGTCACACCACGGAGCTGAGGAG 515273 Query 225211 CTCAGGGCCAGTTTGGTAAGCAAAGGCCACGCCACGCAGCTTCATGATGGCACGGTCCTT 225270 | |||| | |||| ||| ||||| |||||| ||| | | | ||||| Sbjct 515272 C--AGGGGTGTTGGGGTACTGGAAGACCACGTCACGCATCTTGACCAGCGACTTCTCCTT 515215 Query 225271 GGAAGTAATACCCTCCAGGAACCCGGGCTCGGGGAACTCCCACTTG-----GTCACCGCG 225325 || | | ||| || || | || | ||||| || || | |||||| || Sbjct 515214 GGTCTTGACACCGTCAAGCAGAGGAGGGTTGGGGAGCTTGAACGAGTAGTCGTCACC-CG 515156 Query 225326 TCCTTCAGGTCGTAGTAAGATGCAGCCTCGGGT---CGCTTTGCCACGAAAGCAGACAGG 225382 | ||| || ||| | |||||| || ||||| |||||| ||| Sbjct 515155 AGGT-CAGCTCAGTGTATGCACGAGCCTCAGGAACGCGCTT---CACGAACTGGTCAAGG 515100 Query 225383 TTTCCGAGGTGCTTCGTGAGCTTGAGGTTCTTCTCGTAATGAACAATTGCCGAGCACACT 225442 || ||| ||| | ||| ||||| | || | ||| | ||| | | ||||| Sbjct 515099 TTACCGGGGTAGCGCTTGATCTTGAAGCGGTT---GAGATGCAGAATGTCGGTACACACG 515043 Query 225443 GCGTCAAGGAAGCCAGAGTCGTGGGACACAATGATGGACGACACGTTCGTCAGGCCCTTG 225502 ||| ||||| |||||||| ||||||||||| || | | || ||||| ||| Sbjct 515042 TCGTTGAGGAACTTGGAGTCGTGCGACACAATGATCGAGGTGGTCTGGGTAAGGCCGTTG 514983 Query 225503 AGGTGCGTGATGAGCCATGCCACGTTGCTGACGTCCATGTGGTTTGTAGGTTCGTCCAGA 225562 |||| | ||| ||| |||||| ||||||| | ||||| ||||| || || || Sbjct 514982 AGGTAGTCGGTGATCCACTTGACGTTGATGACGTCAAGATGGTTAGTAGGCTCATCAAGC 514923 Query 225563 AGCAGGATGTCAGCATCAATGAGGATGGCGCGCGTGAGAGACAGCTTCATTTTCCAGCCC 225622 ||||| ||||| ||| | ||| | ||| || | || | |||||||| ||||| || Sbjct 514922 AGCAGAATGTCGGCACGGAAGAGCACGGCACGGGCAAGGGCGAGCTTCATCTTCCAACCA 514863 Query 225623 CCGGACAGGGAGCCGATTGAAACAGAGTGCTTAGCT--TCGTCAAAGCCGTACTCCAGGA 225680 || || |||| ||| | ||| || ||| ||||| ||||| |||| || Sbjct 514862 CCCGAGAGGGCAGTGATGGGGCCAGCCTGGC--GCTGGTCGTCGAAGCCCATCTCCTTGA 514805 Query 225681 GCGT--CTGGATAATGCGCTCGGGAGAGCTGCGAGCGGCAACGTTGGGGTCGGACGAGAG 225738 | || | | | | | |||| | | |||| || ||| || |||| | Sbjct 514804 GGGTGGCGGCAGCCGACTCACGGGTAACGT-CGAGACGC----TTGTCAGCG-ACGATAA 514751 Query 225739 GTAATCATATACGGTCATGTCCGAGACAGACGCGTCAATGTCGTGGTCCACGTACACCGT 225798 | || | | ||||| | || |||| | |||||| || |||||| || Sbjct 514750 --AGTCGAGAATCGAGATGTCACCCTCCGAGCCGTCGAGGTCGTGCTCGACGTACCAGGT 514693 Query 225799 CCGGAGCTGAGAAGCATCGGGGAAGCCCTCCAGCTGGCCATTTGCAATCGCACGGAGCAG 225858 |||| || || |||||||||||| | |||||| || || || || | || Sbjct 514692 GCGGACCTCGTCAGGCGAGGGGAAGCCCTCGACCTGGCCGTTCTGGATGGCGCGCATGAG 514633 Query 225859 GGTACTCTTGCCCGCGCCGTTGGGACCGATGAGGCCGTAATGATTCCCGCGCTT--GATG 225916 |||| ||| |||| ||||| ||||| || ||||| | | || ||||| || | Sbjct 514632 GGTAGACTTACCCGAACCGTTACGACCGCAAAGACCGTAGCGGTGGCCACGCTTAAGACG 514573 Query 225917 TTGAGGCGCGTGGAGTTCAGGAGGATCTTGCCACCATAGGCAAGGGAGAACTCGCAATCG 225976 ||| || | |||||| || |||||| |||| ||||| || ||||||| ||| | | Sbjct 514572 GAGAGTAGCA--GTGTTCAGCAGAATCTTGGCACCGTAGGCGAGCGAGAACTGGCAGTTG 514515 Query 225977 CACAGGTCCTCACCCTCCTC 225996 || ||||||||||||||||| Sbjct 514514 CAGAGGTCCTCACCCTCCTC 514495 Score = 96.9 bits (106), Expect = 6e-15 Identities = 92/118 (78%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 224505 CAAGCGACTCGCGGTCAAGGAAGTTCGTCGGCTCATCCAGGATGATAACGTGGGGGCACT 224564 |||||||||| |||||||||||||| |||||||| || || | ||| | |||||| Sbjct 515998 CAAGCGACTCACGGTCAAGGAAGTTGGTCGGCTCGTCAAGCACGATGATGTGGGGCATAC 515939 Query 224565 GCCACAGGGCTGCACCAACCACCAGCTTCACCTTCTGACCGCCAGAGAGGCCGCGGAT 224622 |||| ||| ||||||| || | ||| ||||||||||| || ||||| ||||| || Sbjct 515938 GCCAGGTGGCGGCACCAAGGACGACCTTGACCTTCTGACCACCCGAGAGACCGCGCAT 515881 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921621524458720