Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20cuniculi_20[genbank_20GCA_5F001264635.1_202015-08-11] 76 sequences; 7,459,907 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq39 105 6e-18 seq75 96.9 3e-15 seq58 96.9 3e-15 >seq39 Length=522589 Score = 105 bits (116), Expect = 6e-18 Identities = 138/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 114192 TCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAG 114251 || || || |||||||| || |||| ||||||| || || || || ||||| || || Sbjct 29992 TCCTTCTGGATGTTGTAGTCACTCAGAGTACGACCGTCCTCCAGCTGCTTACCGGCAAAG 29933 Query 114252 ATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGT 114311 || ||||||||||||||||| || || || || ||||| ||||| || | | | Sbjct 29932 ATAAGACGCTGTTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTGCTCTTGACGTTT 29873 Query 114312 TCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACA 114371 || | ||||| | |||||||| |||| || | ||| ||||| || || || || ||| Sbjct 29872 TCGATCGTGTCAGACGATTCGACTTCCAGAGTGATCGTCTTGCCAGTGAGGGTCTTGACA 29813 Query 114372 AAAATCTGCAT 114382 || | |||||| Sbjct 29812 AAGACCTGCAT 29802 Score = 93.3 bits (102), Expect = 4e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 114192 TCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAG 114251 || || || |||||||| ||||| | || || || ||||| || || || || || Sbjct 29764 TCCTTCTGGATGTTGTAGTCGCTGAGCGTGCGGCCGTCCTCAAGCTGCTTGCCGGCAAAG 29705 Query 114252 ATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGT 114311 || || ||||||||||||||||||||||| || ||||| ||||| || | | Sbjct 29704 ATCAGGCGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATCTTGCTCTTGACGTTG 29645 Query 114312 TCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACA 114371 || | ||||| | ||| ||||| || | || | || || || || ||||| |||||| Sbjct 29644 TCGATTGTGTCCGAGGACTCGACTTCGAGCGTGATAGTCTTTCCAGTAAGAGTCTTTACA 29585 Query 114372 AAAATCTGCAT 114382 || || ||||| Sbjct 29584 AAGATTTGCAT 29574 Score = 87.8 bits (96), Expect = 2e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 114192 TCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAG 114251 || || || |||||||| ||||| | || || || ||||| || || || || || Sbjct 30220 TCCTTCTGGATGTTGTAGTCGCTGAGCGTGCGGCCGTCCTCAAGCTGCTTGCCGGCAAAG 30161 Query 114252 ATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGT 114311 || || ||||||||||||||||||||||| || ||||| ||||| || | | | Sbjct 30160 ATCAGGCGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATCTTGCTCTTGACGTTT 30101 Query 114312 TCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACA 114371 || | ||||| | ||| ||||| || | || | || ||||| || || || || || Sbjct 30100 TCGATTGTGTCCGAGGACTCGACTTCGAGCGTGATAGTCTTGCCAGTAAGGGTCTTGACG 30041 Query 114372 AAAATCTGCAT 114382 || | |||||| Sbjct 30040 AACACCTGCAT 30030 Score = 84.2 bits (92), Expect = 2e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 114192 TCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAG 114251 || || || |||||||| || |||| |||||| || || || || || || || || Sbjct 30448 TCCTTCTGGATGTTGTAGTCACTCAGAGTACGGCCGTCCTCCAGCTGCTTGCCGGCAAAG 30389 Query 114252 ATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGT 114311 || ||||||||||||||||| || || || || ||||| ||||| || | | | Sbjct 30388 ATAAGACGCTGTTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTGCTCTTGACGTTT 30329 Query 114312 TCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACA 114371 || | ||||| | ||| || || || | || | || ||||| || || || || ||| Sbjct 30328 TCGATCGTGTCCGAGGACTCAACTTCGAGCGTGATAGTCTTGCCAGTAAGGGTCTTGACA 30269 Query 114372 AAAATCTGCAT 114382 || | |||||| Sbjct 30268 AAGACCTGCAT 30258 >seq75 Length=115788 Score = 96.9 bits (106), Expect = 3e-15 Identities = 161/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 114156 CCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTC 114215 || ||||| || | | |||| ||| | ||| || || || || || || || || Sbjct 54548 CCACCACGGAGACGGAGCACTAGATGGAGCGTGCTCTCCTTCTGGATATTATAGTCACTG 54607 Query 114216 ATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGA 114275 | || || ||| || ||||| || || || |||| ||||||||||| ||||| ||| Sbjct 54608 AGGGTGCGGCCATCCTCTAGTTGCTTGCCTGCAAAGATCAGACGCTGTTGATCCGGGGGA 54667 Query 114276 ATGCCTTCTTTGTCGGCAATCTT-TTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGAC 114334 ||||| || ||||| ||||| | || | || |||| ||| |||| ||| ||||| Sbjct 54668 ATGCCCTCCTTGTCCTGGATCTTGCTCTTGACGATG-TCAATGGTATCGGAGGACTCGAC 54726 Query 114335 GTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGG 114384 || | || | || |||||||| ||||| || ||||| | |||||||| Sbjct 54727 CTCGAGAGTGATTGTCTTGCCGGTAAGAGTCTTGACAAAGACCTGCATGG 54776 >seq58 Length=446738 Score = 96.9 bits (106), Expect = 3e-15 Identities = 140/195 (72%), Gaps = 2/195 (1%) Strand=Plus/Minus Query 114192 TCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAG 114251 || || || |||||||| ||||| | ||| ||| || || || || || || ||| | Sbjct 376230 TCCTTCTGGATGTTGTAGTCGCTAAGAGTGCGACCGTCCTCGAGCTGCTTGCCGGCGAAA 376171 Query 114252 ATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTA-GCTG 114310 || | |||||||||||||||||||| || || ||||| |||||| || | | || Sbjct 376170 ATCAACCGCTGTTGGTCCGGAGGAATACCCTCCTTGTCCTGAATCTTAGACTTGACGATG 376111 Query 114311 TTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 114370 || | |||||| | || ||||| || | || | ||| ||||| || || || || || Sbjct 376110 -TCGATCGTGTCGTTCGACTCGACCTCAAGAGTGATCGTCTTGCCCGTGAGTGTCTTGAC 376052 Query 114371 AAAAATCTGCATGGC 114385 || ||||||||||| Sbjct 376051 GAAGATCTGCATGGC 376037 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420134010850512