Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20cuniculi_20[genbank_20GCA_5F001264635.1_202015-08-11] 76 sequences; 7,459,907 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq63 111 3e-19 >seq63 Length=730213 Score = 111 bits (122), Expect = 3e-19 Identities = 365/564 (65%), Gaps = 15/564 (3%) Strand=Plus/Minus Query 333794 GGTGCAAACAGCGTCGAGGAACCCGGAGTCGTGTGACACAATCACGCACGAAACGTCCT- 333852 ||| || || ||| ||||||| ||||||||| |||||||| | ||| | || Sbjct 515052 GGTACACACGTCGTTGAGGAACTTGGAGTCGTGCGACACAATGAT---CGAGGTGGTCTG 514996 Query 333853 --TAAGGTTGATCAGGTATTCAATCAGCCACCTCACGTTAGACACAGAAAGATGGTTGGT 333910 ||||| | | ||||| || | | |||| | ||||| || ||||||||| || Sbjct 514995 GGTAAGGCCGTTGAGGTAGTCGGTGATCCACTTGACGTTGATGACGTCAAGATGGTTAGT 514936 Query 333911 CGGCTCGTCAAGAAGTAGTAGCTTTGCGTTCAGGAGCATTGCACGTGCAAGAGCGAGTTT 333970 ||||| ||||| || || | | || | ||||| ||||| ||||| ||||| || Sbjct 514935 AGGCTCATCAAGCAGCAGAATGTCGGCACGGAAGAGCACGGCACGGGCAAGGGCGAGCTT 514876 Query 333971 CATTTTCCACCCTCCTGAAAGAGTGTTAATTGGGGCAGATTGGCGCTCAATATCAAAGCC 334030 ||| ||||| || || || || | | || ||| ||| ||||||| || ||||| Sbjct 514875 CATCTTCCAACCACCCGAGAGGGCAGTGATGGGGCCAGCCTGGCGCTGGTCGTCGAAGCC 514816 Query 334031 AACCGATTCTAGAGTAGTTACGATCTTTTCACGAGACCAAATGTTTTCCTTTACTTGTTC 334090 | | | || || | | | ||||| | || || | || | | Sbjct 514815 CATCTCCTTGAGGGTGGCGGCAGCCGACTCACGGGT---AACGT----CGAGAC--GCTT 514765 Query 334091 ATCATTGGCAATGAAGTCAATGATAGCCATGTTAGAATCGGACCCGTCGAGATCGTGTTC 334150 ||| | | || ||||| | || | |||| | || || |||||||| ||||| || Sbjct 514764 GTCAGCGACGATAAAGTCGAGAATCGAGATGTCACCCTCCGAGCCGTCGAGGTCGTGCTC 514705 Query 334151 CACGTAAGCAGTTTTCAAAACATCCGCAGAGGGGAACCCTTCAAGCTGACCGTTCACAAT 334210 ||||| || | | || | |||||||| || || | ||| |||||| || Sbjct 514704 GACGTACCAGGTGCGGACCTCGTCAGGCGAGGGGAAGCCCTCGACCTGGCCGTTCTGGAT 514645 Query 334211 AGCGCGCATCAGAGTTGATTTACCCGCCCCGTTTGGCCCACACAGACCGTAGCGGTTTCC 334270 |||||||| || || || ||||||| ||||| | || || ||||||||||||| || Sbjct 514644 GGCGCGCATGAGGGTAGACTTACCCGAACCGTTACGACCGCAAAGACCGTAGCGGTGGCC 514585 Query 334271 ACGCTTCAGATTGAACCGCGTATTGTTCAGAAGAATTTTTCCACCATATGCCAGAGAAAA 334330 |||||| ||| || | | ||||||| ||||| || |||| || || || || || Sbjct 514584 ACGCTTAAGACGGAGAGTAGCAGTGTTCAGCAGAATCTTGGCACCGTAGGCGAGCGAGAA 514525 Query 334331 TTCACAATCACACAGATCCTCACC 334354 | || | || || |||||||| Sbjct 514524 CTGGCAGTTGCAGAGGTCCTCACC 514501 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102878926070600