Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20cuniculi_20[genbank_20GCA_5F001264635.1_202015-08-11] 76 sequences; 7,459,907 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq40 187 3e-42 >seq40 Length=46956 Score = 187 bits (206), Expect = 3e-42 Identities = 907/1421 (64%), Gaps = 30/1421 (2%) Strand=Plus/Plus Query 113915 AACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCA 113974 ||||| || ||||| || | || || || ||| | |||||||||||||||||||| Sbjct 29821 AACTCGCCGGCGAGCACACGGCGCATGTAAATGTTGCTGGTGTATGGCTCAAAGCACTCG 29880 Query 113975 TTGTTACCCAAGATTTGGGCGGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTA 114034 || || | || ||| || || || |||||||| || || | || || |||| Sbjct 29881 TTAAAGCCGAGAATCTGGCTCGTCGACGCGGTGGGCATCGGGGCGAGCAGCAGCGAGTTA 29940 Query 114035 CGGAGACCCTTTTCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTAGTTGAGCTTTGTC 114094 || || || | | | ||| ||||||| | | ||||||| || | | | | Sbjct 29941 CGCAGGCCGTGCTGCGCAATCTTGGCCTTGAGCGAGGCCCAGTCCCAGAGGTCCGTGGGA 30000 Query 114095 TCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGAGGCTGGCGATCCCTCAAATGTC 114154 | | |||||| || |||| || || || ||| || || ||||| ||||| Sbjct 30001 GTACGGTTCCACATGTCGTACTGCAGAATGCCCTGGCTCGCAGGGCTGCCCTCGTATGTC 30060 Query 114155 TCGTATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGC-CTCGAGGGCTGCGTGATACAT 114213 ||||| | ||| | ||| || | ||| | | || |||||| || ||||| || || Sbjct 30061 TCGTAGGTGCCGTACTGCTCGGCAAGCTCGCA-CGAGCGCTCGAGCGCAGCGTGGTAAAT 30119 Query 114214 TGTCTCAAAAATGCGAGCATTCAT-TGCCTTGGCCTCGTCGGAATCAAACGCG-AGTCGG 114271 |||||||| || | | |||| || | | ||||| | ||||| | | || | Sbjct 30120 CGTCTCAAAGATCTGCACGTTCAGCTGGCGCG-CCTCGGGGCTGTCAAAGGGGTAGCC-- 30176 Query 114272 CACAAA-ATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCAT 114330 || | || || |||| |||||||| |||||||||| || || ||||| || | ||| Sbjct 30177 CATGATCATGAACGCATCAGCGAGACCCTGGACACCGATACCGATCGGGCGGTGGCGCAT 30236 Query 114331 ATTAGACTTTCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATT 114390 || || || || | ||| ||||| || | || ||||||| | | || || || Sbjct 30237 GTTGGAGCGGCGCGCCGACTCGACGGGGTAGTAGTTGATATCGATGATGCGGTTCAGGTT 30296 Query 114391 TTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTC-TCTT 114449 ||||| ||||| | || || || || | | | | | | ||| | | Sbjct 30297 GCGCGTGACGACCTTGGCGACGTCGTGGAGACGCTGGAAGTTGTACGTCTTGGTCGTAGT 30356 Query 114450 --CATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTT 114507 | | |||| | | || || || || ||||| || || ||||| | |||||| || Sbjct 30357 GCCCTCGACAAAGGTGGGCAGCGCAATCGACGCGAGGTTGCACACGGCGGTCTCGTCGGG 30416 Query 114508 ATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTT 114567 ||||||| ||||| || || |||| || || || |||||||| | |||||| Sbjct 30417 CGAGCTGTACTCGATAATCTCTGTGCACAGGTTCGAGCTGCGGATGGTGCCGAGGTTCTT 30476 Query 114568 TTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGT 114627 ||| || ||| |||| ||||||||||| || || | || | |||||||| | Sbjct 30477 TTGGTTGCTCTTGCTGTTCGCAGCATCCTTGTACAGAATAAAGGGGTTGCCCGTCTCGAT 30536 Query 114628 TTGGGACTTGAGAATAGCCTTCCAGA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCC 114686 |||| || ||| || || | ||| | | | ||| || | |||||| ||||| || | Sbjct 30537 CTGGGCCTCGAGGATCGCGTACCACAGCTTTTGCGCCTTG-ACAGTGCGCTTGGCGCGTC 30595 Query 114687 CCTCCTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCC 114746 |||| ||||||| |||||| | || ||||| | || | || ||||| | Sbjct 30596 CCTCGCGCTCGTACCGCTCGTAGAGCTCCTCGAACTCCTTGCCGTAGCAGTCAGAGAGAC 30655 Query 114747 CTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATGA 114806 | || |||| | ||||| | ||| ||||| | | || ||| ||||||||||||| Sbjct 30656 CGGGGGCCTCGGCGGGGCACATGAGCGACCAGTCTTCGTTCTTCTCGACACGCTTCATGA 30715 Query 114807 AGAGGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCT 114866 | || || ||||||||||| || |||| || || || || | || || | || | Sbjct 30716 ACAGATCAGGGATCCAGAGCGCATAGAACAGGTCACGGGCACGGACCTCCTCCTTGCCGT 30775 Query 114867 GATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCG 114926 | || |||| || | || || | | || |||||||| || || ||||| || | Sbjct 30776 GGTTCTTGCGCAGATCGATGAACTCAAACACGTCAGCGTGCCAGGGCTCGAGGTAGACAG 30835 Query 114927 CGATTG-AC-----CCCTTACGACGACCAGCCTGGTTTACATACCTCGCTGTGGCATTAA 114980 | | | || | ||| | | || |||||| || || | || ||| || Sbjct 30836 CAAAGGCACCGGGGCGCTT--GTTG-CCGCCCTGGTCGACGTAGCGGGCAGTGTTGTTGT 30892 Query 114981 ATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAA--TACGAGA 115038 | ||||| ||||| || | || || | ||| || || || || |||||| Sbjct 30893 ACACGCGGAGCATGGGCACAATGCCGTTGCTCACGCCGTTCGTGCCGGCAATGTACGAGC 30952 Query 115039 CTTATTGGCTCTGACATCATGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTG 115098 | | |||| | || ||||||| | |||||| || || ||| ||| ||| Sbjct 30953 C--AGTGGCACGGATGCAGTGGATGTTGAGACCAATGCCACCCGCCGTCTTGCTGATCAT 31010 Query 115099 CGCGCACTCCGTGAGACTGCCGTAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAG 115158 ||||| | |||| || ||||||| || ||||||||||| |||| | | || Sbjct 31011 GGCGCAGGTCTTGAGTGTGTCGTAGATGCCCTCGATCGAGTCGTCCTTCATGCACACGAG 31070 Query 115159 GAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTG 115218 |||||| |||||| || || | || || || ||||||||||| || || | ||| || Sbjct 31071 GAAGCACGACGACATCTGCGGGTTCGGGGTGCCTGCGTTGAAGAGAGTGGGCGACGCATG 31130 Query 115219 GATGAA--CATACCTTGGGACATCTTATCGTAGGTCTCCAAGACGGCGGGAATGTCTTCC 115276 | || | | | | ||||| | | ||| ||||| | |||| |||||| Sbjct 31131 AGTAAAGGCCTTC--TCCGACATGTAGTTGTACGTCTCAATCGCGGCCTCAATGTCCGAG 31188 Query 115277 CCGTGAATACCGATCGAGACCCGCATAAACATGTATTGGGG 115317 ||||| || |||| | ||| ||||| | ||||| ||||| Sbjct 31189 CCGTGGATGCCGACGGCGACACGCATGAGCATGTGCTGGGG 31229 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597353032514080