Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20cuniculi_20[genbank_20GCA_5F001264635.1_202015-08-11] 76 sequences; 7,459,907 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq39 98.7 1e-15 seq58 82.4 8e-11 >seq39 Length=522589 Score = 98.7 bits (108), Expect = 1e-15 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 64253 TCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAA 64312 || || || |||||||| || || ||||| |||| |||||||||||||||||| | Sbjct 29764 TCCTTCTGGATGTTGTAGTCGCTGAGCGTGCGGCCGTCCTCAAGCTGCTTGCCGGCAAAG 29705 Query 64313 ATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACC 64372 || || ||||| ||||| |||||||| || || || || || || || ||| || Sbjct 29704 ATCAGGCGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATCTTGCTCTTGACGTTG 29645 Query 64373 TCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACG 64432 || | ||| || || || ||||| | || | ||||| || || | ||| ||||| Sbjct 29644 TCGATTGTGTCCGAGGACTCGACTTCGAGCGTGATAGTCTTTCCAGTAAGAGTCTTTACA 29585 Query 64433 AAAATTTGCATT 64444 || ||||||||| Sbjct 29584 AAGATTTGCATT 29573 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || |||| | ||| || || |||| || || || || |||||||| || Sbjct 30257 ACCACCACGCAGACGAAGGACAAGGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCT 30198 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 || ||||| |||| |||||||||||||||||| | || || ||||| ||||| ||||| Sbjct 30197 GAGCGTGCGGCCGTCCTCAAGCTGCTTGCCGGCAAAGATCAGGCGCTGTTGGTCCGGAGG 30138 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||| || || || || || || || ||| || || | ||| || || || || Sbjct 30137 AATGCCCTCCTTGTCCTGGATCTTGCTCTTGACGTTTTCGATTGTGTCCGAGGACTCGAC 30078 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||| | || | |||||||| || | || || ||||| | ||||| Sbjct 30077 TTCGAGCGTGATAGTCTTGCCAGTAAGGGTCTTGACGAACACCTGCAT 30030 >seq58 Length=446738 Score = 82.4 bits (90), Expect = 8e-11 Identities = 135/192 (70%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 64253 TCTTTTTGAATGTTGTAATCTGCGACG-GTGCGCGCGTCTTCAAGCTGCTTGCCGGCATA 64311 || || || |||||||| || || | | ||||| |||| || |||||||||||||| | Sbjct 376230 TCCTTCTGGATGTTGTAGTC-GCTAAGAGTGCGACCGTCCTCGAGCTGCTTGCCGGCGAA 376172 Query 64312 AATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAAC 64371 ||| | |||||| ||||| |||||||| || || || || || || || ||| || | Sbjct 376171 AATCAACCGCTGTTGGTCCGGAGGAATACCCTCCTTGTCCTGAATCTTAGACTTGACGAT 376112 Query 64372 CTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTAC 64431 || | || || | || || || | ||| | |||||||| || | || || || Sbjct 376111 GTCGATCGTGTCGTTCGACTCGACCTCAAGAGTGATCGTCTTGCCCGTGAGTGTCTTGAC 376052 Query 64432 GAAAATTTGCAT 64443 ||| || ||||| Sbjct 376051 GAAGATCTGCAT 376040 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499644325337440