Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20cuniculi_20[genbank_20GCA_5F001264635.1_202015-08-11] 76 sequences; 7,459,907 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq40 147 2e-30 seq39 111 1e-19 seq75 104 2e-17 seq58 95.1 1e-14 >seq40 Length=46956 Score = 147 bits (162), Expect = 2e-30 Identities = 295/436 (68%), Gaps = 11/436 (3%) Strand=Plus/Plus Query 47148 GCTTTCGCCATCGTCGAGGGCGTCTTCTTCTCGGGCAGCTTTGCGGCGATATTTTACATG 47207 || ||||| ||| |||||| ||||||| || || |||||| |||| |||| || Sbjct 42028 GCGTTCGCGGCCGTGGAGGGCATCTTCTTTTCCGGATCGTTTGCGTCGATCTTTTGGCTG 42087 Query 47208 AAAACCAAAGGAGTTATGCCCGGCCTCACGTTTAGCAACGAGCTAATCTCGAGAGACGAA 47267 || | || | ||||| || || |||| |||||||| |||||| | ||||| Sbjct 42088 AAGAAGCGTGGCCTGATGCCTGGTCTGTCGTTCTCGAACGAGCTGATCTCGCGGGACGAG 42147 Query 47268 GGCCTGCACACCAACTTTGCCTGTCTCTACTACAAC-ACTAGAGTCGATCAAAAGTTGGA 47326 || |||||||| ||||||| || || | || | || || | ||| || Sbjct 42148 GGACTGCACACTGACTTTGCATGCCTGCTGTTCAGCCACCTGA-------AGAAGCGGGC 42200 Query 47327 CGTGCCCACCGTCAGCGAC---ATGTTTGCCGAAGCCGTCGCCATTGAGATGGAGTTTTT 47383 |||| | | ||| || | |||| ||||| | |||||| ||| ||||| Sbjct 42201 GCACCCCAGCACGATCGAGGCGATCATCACCGAGGCCGTGGAGATTGAGCAGGACTTTTT 42260 Query 47384 CGCCGAGGCTCTGCCCGAATCTTTAGTGGGAATGAACGCGGAGATGATGAGAAAGTACAT 47443 | || || ||||| | || | | || ||||||||| | ||||| | ||||||| Sbjct 42261 GTCGGACGCGCTGCCGGTGTCGCTGATCGGCATGAACGCGCGGCTGATGTGCCAGTACAT 42320 Query 47444 CGAATTTGTCGCCGACCGCCTGCTCGTTCAGCTAAAGTATCCCAAGATTTACCACACCGA 47503 || |||||||| ||||| ||||| || ||| | | || ||| |||||| | | Sbjct 42321 TGAGTTTGTCGCAGACCGGCTGCTGGTGGCGCTCGGGAACCCGAAGCACTACCACGCAAA 42380 Query 47504 GAATCCATTCGAGTTTATGAACAACATTTCGCTCGAGGGCAAGACCAACTTTTTCGAGAA 47563 ||| |||||||| |||||| | ||||||||||| |||||||| | |||||||||||| Sbjct 42381 GAACCCATTCGACTTTATGGAGAACATTTCGCTGCAGGGCAAGTCGAACTTTTTCGAGCG 42440 Query 47564 GCGCGTCGGCGAATAT 47579 || || ||||| ||| Sbjct 42441 TCGGGTGGGCGACTAT 42456 Score = 118 bits (130), Expect = 1e-21 Identities = 554/860 (64%), Gaps = 31/860 (4%) Strand=Plus/Plus Query 145714 TCGGCGTCGACGGTGAACTGCGTCGCTTGAGCGGCCGGTTTTGTGCGCAGATAGTACATG 145773 ||||| ||| |||||||| |||| | ||||| || || ||||| ||||| | Sbjct 29458 TCGGCACTGACAGTGAACTGGATCGCGTTGGCGGCAGGGCGGGTACGCAGGTAGTAGCTT 29517 Query 145774 CCGGTCTTGAGCTGTTTCTGCCACGTGTAAAAGTGTATGCTCGACA--TGACCGAGTACG 145831 || |||||||| |||| ||| ||||||||| || || | || || | ||| Sbjct 29518 CCAGTCTTGAGACCCTTCTTCCAGCCGTAAAAGTGCATCGACGTAAGCTGGCCAA--ACG 29575 Query 145832 TGGGTTCGGCGACAAACAAATTTAGAGATT--GGCTCTGATCAATGAAAGGAGCCCGGTC 145889 | || || || ||| | |||| | ||||||| ||||| | | | ||||| Sbjct 29576 TAGGCGCGCT--CAGGTGAATGTTGAGACTCTGGCTCTGGCAGATGAATGCACCGCGGTC 29633 Query 145890 GGCGGCCATGTCTATCATGCACTTTGATTTAATTTCCCATGCGGTTTTAAAGAGATCCTT 145949 |||||||||||| || ||| |||| | || ||||| |||| || |||| |||| Sbjct 29634 GGCGGCCATGTCGATAATGACCTTTTGGCTGATCTCCCACACGGTCTTGTAGAGCGCCTT 29693 Query 145950 GACGTGCTGGGGTATTTCGTCAATGTTCTGCACAGACCCATTTTCGGCCAATATTTTGTT 146009 || | | ||| || ||| |||||||| | ||| ||| | | || | | | Sbjct 29694 GATCCGGTCGGGAATATCGGGGATGTTCTGGATAGAGCCACTGTGCGCGATCAGACGCTC 29753 Query 146010 GCGCAATTCTGGAGT-GT---AAATGTTCAAGTCTACGAGGGCCTTGATGAGATACTGGT 146065 ||||| ||| | || | | | || || || || | || || || ||| Sbjct 29754 GCGCA----TGGTATCGTTCCACAGGCCCAGCTCGACAAGCTCGCGGAGCAGCCACGGGT 29809 Query 146066 TGACCACCTGAAACTCGCCGGCGAGAACGCGCCTCAGATACACGTTGCTGGTGAACGGCT 146125 | |||||||| |||||||||||||| || || | || || | |||||||||| | |||| Sbjct 29810 TCACCACCTGGAACTCGCCGGCGAGCACACGGCGCATGTAAATGTTGCTGGTGTATGGCT 29869 Query 146126 CGAACGACTCGTTGTTACCGAGTATCTGCGCCGTCGTAGCGGTAGGCATGTACGCCACCA 146185 | || ||||||| ||||| ||||| ||||| ||||| ||||| || | || Sbjct 29870 CAAAGCACTCGTTAAAGCCGAGAATCTGGCTCGTCGACGCGGTGGGCATCGGGGCGAGCA 29929 Query 146186 GCAAAGAGTTTCTCACGCCGTGTCTTTG-AATCTTTTCCCGTAGTTTGGACCAATTCCAC 146244 ||| ||||| | || |||||| || | |||||| || || || ||| | ||| Sbjct 29930 GCAGCGAGTTACGCAGGCCGTG-CTGCGCAATCTTGGCCTTGAGCGAGGCCCAGTCCCAG 29988 Query 146245 AAATGATCCGTGGGATAGATATTGTAGTTGTCGTAATGCATAGTGCCGCGGAACAGGGGG 146304 | | ||||||||| || | ||||||| |||| | |||| || | ||| Sbjct 29989 A---GGTCCGTGGGAGTACGGTTCCACATGTCGTACTGCAGAATGCCCTGGCTCGCAGGG 30045 Query 146305 CTATTCTCGTACGATTCATAAGGACCGTCGATCTTGGCCAGTTCGCAGCTAGC-TTCCAG 146363 || |||||| | || || | |||| || ||| || ||||| | ||| || || Sbjct 30046 CTGCCCTCGTATGTCTCGTAGGTGCCGTACTGCTCGGCAAGCTCGCA-CGAGCGCTCGAG 30104 Query 146364 AGCCGAAAAGTATATGGTCTCCGCGATCATGTA-GTTGACGCT-CCTGGCCTCCTCGCTG 146421 || | ||| || ||||| |||| || | ||| | ||| | ||||| |||| Sbjct 30105 CGCAGCGTGGTAAATCGTCTCAAAGATC-TGCACGTTCA-GCTGGCGCGCCTCGGGGCTG 30162 Query 146422 TCGTAGGGGATATCGAGAAGCACAAAGGCGTCGGCGAGACCCTGTATCCCGACACCAACG 146481 || ||||| | | | || || || || ||||||||||| | |||| ||| | Sbjct 30163 TCAAAGGGGTAGCCCATGATCATGAACGCATCAGCGAGACCCTGGACACCGATACCGATC 30222 Query 146482 GGGCGGTGTTTCTTGTTACTGTTCGCAGCGCC--CGCAGTGGGATAGTGGTTGCTGTCGA 146539 |||||||| | |||| | || ||||| | | ||| |||| |||| | |||| Sbjct 30223 GGGCGGTGGCGCATGTT--GGAGCGGCGCGCCGACTCGACGGGGTAGTAGTTGATATCGA 30280 Query 146540 TGATCTTGTTGAGATTACGC 146559 |||| ||| || || ||| Sbjct 30281 TGATGCGGTTCAGGTTGCGC 30300 >seq39 Length=522589 Score = 111 bits (122), Expect = 1e-19 Identities = 142/193 (74%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 126922 CTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTA 126981 ||| || || || ||||| |||| | |||||| || || ||||| || || || | Sbjct 29765 CTCCTTCTGGATGTTGTAGTCGCTGAGCGTGCGGCCGTCCTCAAGCTGCTTGCCGGCAAA 29706 Query 126982 GATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTT 127040 ||||| ||||| || || ||||| ||||||||||||||| ||| || ||||| ||| Sbjct 29705 GATCAGGCGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATCTTGCTCTTGACGTT 29646 Query 127041 GTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTA 127100 || ||| ||||||| ||||||||||| || | || || || || ||||| |||| Sbjct 29645 GT-CGATTGTGTCCGAGGACTCGACTTCGAGCGTGATAGTCTTTCCAGTAAGAGTCTTTA 29587 Query 127101 CAAAAATCTGCAT 127113 |||| || ||||| Sbjct 29586 CAAAGATTTGCAT 29574 Score = 104 bits (114), Expect = 2e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 126922 CTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTA 126981 ||| || || || ||||| |||| | |||||| || || ||||| || || || | Sbjct 30221 CTCCTTCTGGATGTTGTAGTCGCTGAGCGTGCGGCCGTCCTCAAGCTGCTTGCCGGCAAA 30162 Query 126982 GATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTG 127041 ||||| ||||| || || ||||| ||||||||||||||| ||| || ||||| | Sbjct 30161 GATCAGGCGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATCTTGCTCTTGACGTT 30102 Query 127042 TTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 127101 ||||| ||||||| ||||||||||| || | || ||||| || || || || || Sbjct 30101 TTCGATTGTGTCCGAGGACTCGACTTCGAGCGTGATAGTCTTGCCAGTAAGGGTCTTGAC 30042 Query 127102 AAAAATCTGCAT 127113 || | |||||| Sbjct 30041 GAACACCTGCAT 30030 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 |||||||| | || | ||| | ||| | ||| ||| || || || ||||| || | | Sbjct 30028 CCACCGCGGAGACGGAGCACGAGATGGAGCGTGCTCTCCTTCTGGATGTTGTAGTCACTC 29969 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || ||| || || ||||| || || || |||| | ||||| || || || || Sbjct 29968 AGAGTACGACCGTCCTCCAGCTGCTTACCGGCAAAGATAAGACGCTGTTGGTCCGGGGGG 29909 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || |||||||||||| ||| || ||||| | ||||| ||||| | |||||| Sbjct 29908 ATACCCTCCTTGTCCTGGATCTTGCTCTTGACGTTTTCGATCGTGTCAGACGATTCGACT 29849 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | || | ||| ||||| || || || || ||||| | |||||| Sbjct 29848 TCCAGAGTGATCGTCTTGCCAGTGAGGGTCTTGACAAAGACCTGCAT 29802 >seq75 Length=115788 Score = 104 bits (114), Expect = 2e-17 Identities = 165/234 (71%), Gaps = 2/234 (1%) Strand=Plus/Plus Query 126883 TGCTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATC 126942 ||| ||||| || | || | ||| | ||| | ||| ||| || || ||||| || || Sbjct 54544 TGCGCCACCACGGAGACGGAGCACTAGATGGAGCGTGCTCTCCTTCTGGATATTATAGTC 54603 Query 126943 GCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGG 127002 | | ||||| ||| ||||| || || || || |||||| ||||| ||||| || Sbjct 54604 ACTGAGGGTGCGGCCATCCTCTAGTTGCTTGCCTGCAAAGATCAGACGCTGTTGATCCGG 54663 Query 127003 AGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCT 127061 || ||||||||||||||| ||| || ||||| | || || | ||| || | || Sbjct 54664 GGGAATGCCCTCCTTGTCCTGGATCTTGCTCTTGACGATG-TCAATGGTATCGGAGGACT 54722 Query 127062 CGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGG 127115 |||| |||| || | || |||||||| ||||| || ||||| | |||||||| Sbjct 54723 CGACCTCGAGAGTGATTGTCTTGCCGGTAAGAGTCTTGACAAAGACCTGCATGG 54776 >seq58 Length=446738 Score = 95.1 bits (104), Expect = 1e-14 Identities = 140/196 (71%), Gaps = 2/196 (1%) Strand=Plus/Minus Query 126922 CTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTA 126981 ||| || || || ||||| |||| | |||||| || || ||||| || || ||| | Sbjct 376231 CTCCTTCTGGATGTTGTAGTCGCTAAGAGTGCGACCGTCCTCGAGCTGCTTGCCGGCGAA 376172 Query 126982 GATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTT 127040 ||||| ||||| || || ||||| || |||||||||||| || || ||||| | | Sbjct 376171 AATCAACCGCTGTTGGTCCGGAGGAATACCCTCCTTGTCCTGAATCTTAGACTTGACGAT 376112 Query 127041 GTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTA 127100 || ||| ||||| | |||||| || | || | ||| ||||| || || || || | Sbjct 376111 GT-CGATCGTGTCGTTCGACTCGACCTCAAGAGTGATCGTCTTGCCCGTGAGTGTCTTGA 376053 Query 127101 CAAAAATCTGCATGGC 127116 | || ||||||||||| Sbjct 376052 CGAAGATCTGCATGGC 376037 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475500348274240