Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20cuniculi_20[genbank_20GCA_5F001264635.1_202015-08-11] 76 sequences; 7,459,907 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq75 120 3e-22 seq40 109 5e-19 seq39 87.8 2e-12 >seq75 Length=115788 Score = 120 bits (132), Expect = 3e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173 || || ||||| | | ||||||||| ||||| ||||| ||||||||||| || ||| Sbjct 54548 CCACCACGGAGACGGAGCACTAGATGGAGCGTGCTCTCCTTCTGGATATTATAGTCACTG 54607 Query 45174 ACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGA 45233 | ||| ||| || | ||| || ||||| | |||| || || || ||||| ||| Sbjct 54608 AGGGTGCGGCCATCCTCTAGTTGCTTGCCTGCAAAGATCAGACGCTGTTGATCCGGGGGA 54667 Query 45234 ATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGAC 45292 ||||| || || || || || || |||| || | || | ||| ||||| |||||||| Sbjct 54668 ATGCCCTCCTTGTCCTGGATCTTGCTCTTGA-CGATGTCAATGGTATCGGAGGACTCGAC 54726 Query 45293 TTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 |||||||| | || |||||||| ||||| || ||||| | ||||| Sbjct 54727 CTCGAGAGTGATTGTCTTGCCGGTAAGAGTCTTGACAAAGACCTGCAT 54774 >seq40 Length=46956 Score = 109 bits (120), Expect = 5e-19 Identities = 197/282 (70%), Gaps = 6/282 (2%) Strand=Plus/Minus Query 124038 TGCGAACTTGC-GAAAATTCACGGCGCGTACGAAAGTTACGCGGGCAGCCCGGCGAGCCG 124096 ||||| ||||| || | | ||||| | ||||| | |||| ||||||||| ||||||| Sbjct 30092 TGCGAGCTTGCCGAGCAGT-ACGGCACCTACGAGACATACGAGGGCAGCCCTGCGAGCCA 30034 Query 124097 AGGTATTTTGCAGTACGACATGTGGAATGCTACACCGACAAATTTGTGGGACTGGAGCGT 124156 || ||| ||||||||||||||||||| ||| || || | | ||||||||| || | Sbjct 30033 GGGCATTCTGCAGTACGACATGTGGAACCGTACTCCCACGGACCTCTGGGACTGG-GCCT 29975 Query 124157 --TTTAAAACAACGCATATCGACGCACGGTTTGCGTAACTCGCTGTTGGTGGCGTACATG 124214 | || | | | || || |||||| |||||||||||||| || | || ||| Sbjct 29974 CGCTCAAGGCCAAG-ATTGCGCAGCACGGCCTGCGTAACTCGCTGCTGCTCGCCCCGATG 29916 Query 124215 CCGACGGCAACCACTGCTCAAATTTTAGGAAACAACGAATCCTTCGAGCCGTTCACTAAC 124274 || || || | || || ||| | || ||||| | ||| ||||| | ||| | | Sbjct 29915 CCCACCGCGTCGACGAGCCAGATTCTCGGCTTTAACGAGTGCTTTGAGCCATACACCAGC 29856 Query 124275 AATTTGTACGTGCGACGAGTGTTAGCCGGCGATTTTCAAGTG 124316 || | ||| |||| || ||| | |||||||| || || ||| Sbjct 29855 AACATTTACATGCGCCGTGTGCTCGCCGGCGAGTTCCAGGTG 29814 >seq39 Length=522589 Score = 87.8 bits (96), Expect = 2e-12 Identities = 136/192 (71%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 45150 TCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTAT 45209 ||||| ||||| || || ||||||| || || || | || || || || | Sbjct 29764 TCCTTCTGGATGTTGTAGTCGCTGAGCGTGCGGCCGTCCTCAAGCTGCTTGCCGGCAAAG 29705 Query 45210 ATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT 45269 |||| || || |||||||| |||||||| || || || || || || |||| || | Sbjct 29704 ATCAGGCGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATCTTGCTCTTGA-CGTT 29646 Query 45270 -TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTAC 45328 || | ||||| || |||||||||||||| || | || || || || ||||| ||||| Sbjct 29645 GTCGATTGTGTCCGAGGACTCGACTTCGAGCGTGATAGTCTTTCCAGTAAGAGTCTTTAC 29586 Query 45329 AAAAATTTGCAT 45340 ||| |||||||| Sbjct 29585 AAAGATTTGCAT 29574 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 452002770596960