Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20cuniculi_20[genbank_20GCA_5F001264635.1_202015-08-11] 76 sequences; 7,459,907 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq40 226 5e-54 >seq40 Length=46956 Score = 226 bits (250), Expect = 5e-54 Identities = 533/798 (67%), Gaps = 15/798 (2%) Strand=Plus/Minus Query 159652 CTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGATTCCATGAACCCGAATGGGTTCTT 159711 |||||||||||| | |||||||| || || || ||||| || ||||||||||||| Sbjct 42438 CTCGAAAAAGTTCGACTTGCCCTGCAGCGAAATGTTCTCCATAAAGTCGAATGGGTTCTT 42379 Query 159712 CACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCAGCAACCTGTCTGCCACAAATTCGAT 159771 |||| ||| ||||||| ||||| ||| |||||| || |||||| ||||| || || Sbjct 42378 TGCGTGGTAGTGCTTCGGGTTCCCGAGCGCCACCAGCAGCCGGTCTGCGACAAACTCAAT 42319 Query 159772 GTAGCTACACATCTGCTCACAGTTGATCCCCAGCAGCCTAACGGGGAGCGCTTCCGACAG 159831 ||| |||||| || ||| || || | |||| || || ||||| ||||||| Sbjct 42318 GTACTGGCACATCAGCCGCGCGTTCATGCCGATCAGCGACACCGGCAGCGCGTCCGACAA 42259 Query 159832 AAACTCCTTCTCAATCTCGACCGCTTCGGTCACAATCTGCGAGACACGTTC----GTACC 159887 ||| |||| ||||||||| || || ||||| | ||| | || ||| | || | Sbjct 42258 AAAGTCCTGCTCAATCTCCACGGCCTCGGTGATGATCGCCTCGA-TCGTGCTGGGGTGCG 42200 Query 159888 CCGGCTTGCCCAAAATGTGGTCCTTAAACAGGAGGCACGCAAAGTCGCAGTGCAGTCCCT 159947 || |||| || ||| | ||||| ||||| |||||||| ||||||||||| Sbjct 42199 CCCGCTTCTTCA------GGTGGCTGAACAGCAGGCATGCAAAGTCAGTGTGCAGTCCCT 42146 Query 159948 CGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCATGATCCCACGCGGTTTGA 160007 ||||||| ||||| | |||||| || | || || ||||| | |||||| || | Sbjct 42145 CGTCCCGCGAGATCAGCTCGTTCGAGAACGACAGACCAGGCATCAGGCCACGCTTCTTCA 42086 Query 160008 GCCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAGATCCCCTCCACGGCCGCAAACGCCA 160067 ||||||| || | |||||| | ||| ||| ||||| |||||||||||||| ||||||| Sbjct 42085 GCCAAAAGATCGACGCAAACGATCCGGAAAAGAAGATGCCCTCCACGGCCGCGAACGCCA 42026 Query 160068 CGAGCCTCTCACCAAAAG-AGGCGTTGGTGTCATGGGTCCACCTTTTGGCCCATTCAGCC 160126 | || | ||| | | ||| ||| | ||| | | |||||| ||||| || ||| Sbjct 42025 CCAGGCGCTC-CGAGAAGCTCGCGCGGCGGTCGTTGATCCACCGCAGCGCCCACTCCGCC 41967 Query 160127 TTCTTTGCGATGCACGGCATGCGCTCGACGGCGTTAAACAATCTGTCCTGCTCCTTCACA 160186 ||||| | ||| || ||||| |||| ||||| || ||| || Sbjct 41966 TTCTTCTTCACCACCGGGATCGTCTCGATCGCGTCAAACAGGTACTCGCGCTGCTCGGGC 41907 Query 160187 TCCTTGATCAGAGTAGCAATCAGCTTCGAGTACATTTCTGCGTGCACATTTTCGATGGCC 160246 || ||| || | |||||| ||||||| | || | ||| | ||| || || Sbjct 41906 TCGCGGATATACGTGTCGATCAGCAGCGAGTACGTCTCCGAGTGGATATTCTCCATCATG 41847 Query 160247 ATCTGAAAGTTGTAGAAATATGTCGCCTCCAGATACTGCACCTCCTGTGTGAACCTTTGA 160306 ||||| ||| |||||| | |||||| ||||||||| | ||| | | Sbjct 41846 ATCTGGAAGCCGTAGAAGCAGCGCGCCTCGGCGGCCTGCACCTCGGTCGAGAAGCGCTCC 41787 Query 160307 CCCAGATTGGCATTAACCAACCCGTCGGCGGCCGCAAAGAAAGCCAACACGTGAGAGATG 160366 ||| || | || || | ||||| | || |||||||| |||| ||| || ||| Sbjct 41786 AGCAGGTTCTCGTTCACAATGCCGTCCGACGCGGCAAAGAACGCCAGCACATGGCTGATA 41727 Query 160367 AAATGTCTCTCGTCTTTGTTGAGTCTCTTTTCCCAGT-GTGTCACGTCTTGGGCCAAATC 160425 || || | ||| | | ||| || | || ||||||| ||| || ||| | | || || Sbjct 41726 AAGTGGCGCTCATTGTCGTTCAGCCGGTTGTCCCAGTCGTG-CAGGTCCTTGCTCAGGTC 41668 Query 160426 AACCTCTTCCGCGCTCCA 160443 | ||| || ||| |||| Sbjct 41667 GATCTCCTCGGCGGTCCA 41650 Score = 179 bits (198), Expect = 6e-40 Identities = 474/709 (67%), Gaps = 16/709 (2%) Strand=Plus/Plus Query 203846 ACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAGATAGTACATGCCGGTCTTT 203905 || |||||||| || ||||| ||||||| | | | | ||| ||||| | || ||||| Sbjct 29467 ACAGTGAACTGGATCGCGTTGGCGGCAGGGCGGGTACGCAGGTAGTAGCTTCCAGTCTTG 29526 Query 203906 AGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCA-CGTTGGGGTCGGC 203964 || ||||||| ||| ||||| | |||||| || | || | || | ||| || | || Sbjct 29527 AGACCCTTCTTCCAGCCGTAAAAGTGCATCGACGTAAGCTGGCCAAACGTAGGCG-CGCT 29585 Query 203965 CATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATCTGCGGCCATATT 204024 || ||||||||| ||| |||||| ||| |||||| | | || || |||||||| | Sbjct 29586 CAGGTGAATGTTGAGACTCTGGCTCTGGCAGATGAATGCACCGCGGTCGGCGGCCATGTC 29645 Query 204025 GATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACA-CGTCTCTGGTGTGTTGAG 204083 ||||||| ||| || ||||||||||| |||||| | | || || || | | | | Sbjct 29646 GATAATGACCTTTTGGCTGATCTCCCACACGGTCTTGTAGAGCGCCT-TGATCCGGTCGG 29704 Query 204084 GCACATCTTCCCACGTCCT-GATCGAGCCGTTGTCGGCCATCAGTCTCATCCTCGTCTCC 204142 | | ||| | || || ||| ||||| ||| || ||||| | | | | | Sbjct 29705 GAATATC-GGGGATGTTCTGGATAGAGCCACTGTGCGCGATCAGACGCTCGCGCATGGTA 29763 Query 204143 TCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGATGATCTGAAAG 204202 || ||||| ||||| | || ||||| || | ||| ||||| | | ||| || Sbjct 29764 TCGTTCCACAGGCCCAGCTCGACAAGCTCGCGGAGCAGCCACGGGTTCACCACCTGGAAC 29823 Query 204203 TCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAACGCCTCGTTG 204262 || |||| ||||| | || || | | |||| ||||| |||| || || |||||| Sbjct 29824 TCGCCGGCGAGCACACGGCGCATGTAAATGTTGCTGGTGTATGGCTCAAAGCACTCGTTA 29883 Query 204263 TTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGGGAGTTGCGC 204322 ||||| |||||| || || |||||||| || || || ||||| ||||| ||| Sbjct 29884 AAGCCGAGAATCTGGCTCGTCGACGCGGTGGGCATCGGGGCGAGCAGCAGCGAGTTACGC 29943 Query 204323 ACACCGTATTTTTGGACCCTGCGCTTCAGAGAGGTCCAGTCGTGCATCGCACTGGGTTTC 204382 | |||| | | | || ||| || |||| |||||| | | |||| | Sbjct 29944 AGGCCGTGCTGCGCAATCTTGGCCTTGAGCGAGGCCCAGTCCCAGAGGTCCGTGGGAGTA 30003 Query 204383 ACGCCCCACATGTCGAACTGAAAGATGCCTTGACTGACTGGGCTGCCCTTGTACGTCGGA 204442 | |||||||||| |||| | ||||| || || | |||||||||| ||| ||| Sbjct 30004 CGGTTCCACATGTCGTACTGCAGAATGCCCTGGCTCGCAGGGCTGCCCTCGTATGTCTCG 30063 Query 204443 TAAG-GCTGATCCTCTTCTGCCAGCTTGCACGAG---GCGGCCATGGCGTGATAGTACAT 204498 || | || | | || || || |||| ||||||| || | ||||| ||| || Sbjct 30064 TAGGTGCCG-TACTGCTCGGCAAGCTCGCACGAGCGCTCGAGCGCAGCGTG---GTAAAT 30119 Query 204499 GGTCTCAAAGATCTGAACGTTTAATCTGGCG-GCCTCCGTTCCGTCAAA 204546 |||||||||||||| ||| || | |||||| ||||| | | |||||| Sbjct 30120 CGTCTCAAAGATCTGCACG-TTCAGCTGGCGCGCCTCGGGGCTGTCAAA 30167 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795154444602560