Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20cuniculi_20[genbank_20GCA_5F001264635.1_202015-08-11] 76 sequences; 7,459,907 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq39 127 5e-24 seq58 123 6e-23 seq2 118 2e-21 >seq39 Length=522589 Score = 127 bits (140), Expect = 5e-24 Identities = 150/203 (74%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || || ||||| || |||||| |||| |||||||||| || ||| | || || Sbjct 30013 AGCACGAGATGGAGCGTGCTCTCCTTCTGGATGTTGTAGTCACTCAGAGTACGACCGTCC 29954 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 ||||||||||| ||||| ||||| |||||||| |||||||| || || || ||| Sbjct 29953 TCCAGCTGCTTACCGGCAAAGATAAGACGCTGTTGGTCCGGGGGGATACCCTCCTTGTCC 29894 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| ||| ||||| ||||| | | ||| || |||| ||||||||| Sbjct 29893 TGGATCTTGCTCTTGACGTTTTCGATCGTGTCAGACGATTCGACTTCCAGAGTGATCGTC 29834 Query 199598 TTACCCGTGAGAGTTTTCACAAA 199620 || || ||||| || || ||||| Sbjct 29833 TTGCCAGTGAGGGTCTTGACAAA 29811 Score = 127 bits (140), Expect = 5e-24 Identities = 150/203 (74%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 |||||||||||||| || |||||| |||| |||||||||| || ||| | || || Sbjct 30469 AGGACAAGGTGGAGCGTGCTCTCCTTCTGGATGTTGTAGTCACTCAGAGTACGGCCGTCC 30410 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 ||||||||||| ||||| ||||| |||||||| |||||||| || || || ||| Sbjct 30409 TCCAGCTGCTTGCCGGCAAAGATAAGACGCTGTTGGTCCGGGGGGATACCCTCCTTGTCC 30350 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| ||| ||||| ||||| | | || || || | |||||| ||| Sbjct 30349 TGGATCTTGCTCTTGACGTTTTCGATCGTGTCCGAGGACTCAACTTCGAGCGTGATAGTC 30290 Query 199598 TTACCCGTGAGAGTTTTCACAAA 199620 || || || || || || ||||| Sbjct 30289 TTGCCAGTAAGGGTCTTGACAAA 30267 Score = 109 bits (120), Expect = 1e-18 Identities = 146/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||||||||| ||||| |||||| |||| ||||||||| | || | || || Sbjct 30241 AGGACAAGGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTGAGCGTGCGGCCGTCC 30182 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| ||||| ||||| || ||||| ||||||||| ||| || || ||| Sbjct 30181 TCAAGCTGCTTGCCGGCAAAGATCAGGCGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCC 30122 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| ||| ||||| ||||| | | || || || | |||||| ||| Sbjct 30121 TGGATCTTGCTCTTGACGTTTTCGATTGTGTCCGAGGACTCGACTTCGAGCGTGATAGTC 30062 Query 199598 TTACCCGTGAGAGTTTTCACAAA 199620 || || || || || || || || Sbjct 30061 TTGCCAGTAAGGGTCTTGACGAA 30039 >seq58 Length=446738 Score = 123 bits (136), Expect = 6e-23 Identities = 155/210 (74%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAA-AGTCCTTCCATC 199476 ||||| ||||||||||| |||||| |||| ||||||||| || || ||| | || || Sbjct 376251 AGGACGAGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTC-GCTAAGAGTGCGACCGTC 376193 Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536 || |||||||| |||||||| || | ||||| ||||||||| ||| || || || Sbjct 376192 CTCGAGCTGCTTGCCGGCGAAAATCAACCGCTGTTGGTCCGGAGGAATACCCTCCTTGTC 376133 Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596 ||||||||| ||| ||| |||| ||||| | | || || || | |||||||| Sbjct 376132 CTGAATCTTAGACTTGACGATGTCGATCGTGTCGTTCGACTCGACCTCAAGAGTGATCGT 376073 Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||| |||||||| || || || || || || Sbjct 376072 CTTGCCCGTGAGTGTCTTGACGAAGATCTG 376043 >seq2 Length=94478 Score = 118 bits (130), Expect = 2e-21 Identities = 159/219 (73%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAA-AGT 199467 || || | ||| |||||||||||||| |||||| |||| ||||||||| || || || Sbjct 13084 CGCAGACGCAGCACAAGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTC-GCTAAGGGT 13142 Query 199468 CCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCC 199527 | ||||| || |||||||| ||||| ||||| || ||||| |||||||| || || Sbjct 13143 GCGGCCATCCTCGAGCTGCTTGCCGGCAAAGATCAGGCGCTGTTGGTCCGGGGGGATACC 13202 Query 199528 TTCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAA 199587 || ||||| |||||| ||| ||| |||| ||||| | | || || || | Sbjct 13203 CTCCTTGTCCTGGATCTTTCCCTTGACGTTCTCGATAGTGTCGGAAGACTCCACCTCAAG 13262 Query 199588 CGTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| |||||||| || || || || | ||| Sbjct 13263 GGTGATAGTCTTCCCCGTGAGGGTCTTGACGAAGACTTG 13301 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178920452025092