Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20cuniculi_20[genbank_20GCA_5F001264635.1_202015-08-11] 76 sequences; 7,459,907 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq40 179 5e-40 seq20 87.8 2e-12 >seq40 Length=46956 Score = 179 bits (198), Expect = 5e-40 Identities = 741/1148 (65%), Gaps = 38/1148 (3%) Strand=Plus/Minus Query 111611 CCCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGT 111670 ||| ||| ||||| ||||||| ||||| |||| ||||| || || ||||| | | Sbjct 31230 CCCCCAGCACATGCTCATGCGTGTCGCCGTCGGCATCCACGGCTCGGACATTGAGGCCGC 31171 Query 111671 TTTGGAGACATACGACAAGATGTCCCGTGGTATG--TTCATCCACGCAACACCAACCCTC 111728 | ||||| ||| || | ||||| | | | | || | || || | || || ||| Sbjct 31170 GATTGAGACGTACAACTACATGTC--GGAGAAGGCCTTTACTCATGCGTCGCCCACTCTC 31113 Query 111729 TTCAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTAT-TGCAAACAAGGA 111787 |||||||| || || || | || || ||||| || ||||| | |||| ||||| Sbjct 31112 TTCAACGCAGGCACCCCGAACCCGCAGATGTCGTCGTGCTTCCTCGTGTGCATG-AAGGA 31054 Query 111788 GGATTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGC 111847 || || ||| | ||||| |||| ||| |||| || ||| ||| ||| ||| Sbjct 31053 CGACTCGATCGAGGGCATCTACGACACACTCAAGACCTGCGCCATGATCAGCAAGACGGC 30994 Query 111848 TGGTGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTA--TTAGAGGT 111905 ||||| || || | ||||||| || | |||| | |||||| || || Sbjct 30993 GGGTGGCATTGGTCTCAACATCCACTGCATCCGTGCCACT--GGCTCGTACATTGCCGGC 30936 Query 111906 ACAAATGGTCA-ATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCG 111964 || || || | || | || ||| | || ||||| ||||| | ||| ||| || || Sbjct 30935 ACGAACGGCGTGAGCA-ACGGCATTGTGCCCATGCTCCGCGTGTACAACAACACTGCCCG 30877 Query 111965 CTATGTAAACCAAGCTGGGCGTCG-CAAG------GGATCTATCGCAGTCTATCTTGAGC 112017 ||| || |||| ||||| | |||| || | | || ||||| || |||| Sbjct 30876 CTACGTCGACCA----GGGCGGCAACAAGCGCCCCGGTGCCTTTGCTGTCTACCTCGAGC 30821 Query 112018 CATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGG 112077 | |||||||| || | | |||||| | || |||| ||||| || | ||||||| Sbjct 30820 CCTGGCACGCTGACGTGTTTGAGTTCATCGATCTGCGCAAGAACCACGGCAAGGAGGAGG 30761 Query 112078 CGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTG 112137 || ||| || || |||| || |||||||| || ||||| ||||||||| | || | Sbjct 30760 TCCGTGCCCGTGACCTGTTCTATGCGCTCTGGATCCCTGATCTGTTCATGAAGCGTGTCG 30701 Query 112138 AGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCG 112197 || ||| | | ||||| ||| | || || | | |||| ||||||||||| || | Sbjct 30700 AGAAGAACGAAGACTGGTCGCTCATGTGCCCCGCCGAGGCCCCCGGTCTCTCTGACTGCT 30641 Query 112198 TGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGCG- 112256 || ||||||| || | |||||| ||||||| || | || || | ||| Sbjct 30640 ACGGCAAGGAGTTCGAGGAGCTCTACGAGCGGTACGAGCGCGAGGGACGCGCCA-AGCGC 30582 Query 112257 ACGGTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTAC 112315 || || | || || | | ||||| | || || ||| || | || | |||||| || | Sbjct 30581 ACTGT-CAAGGCGCAAAAGCTGTGGTACGCGATCCTCGAGGCCCAGATCGAGACGGGCAA 30523 Query 112316 ACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGT 112375 || | ||| || ||||| || || ||| ||||| || |||||||| | || Sbjct 30522 CCCCTTTATTCTGTACAAGGATGCTGCGAACAGCAAGAGCAACCAAAAGAACCTCGGCAC 30463 Query 112376 GATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAG--ACAAAGATGAGACG 112433 ||| || || ||||| || ||||| || | || ||||| || ||||| Sbjct 30462 CATCCGCAGCTCGAACCTGTGCACAGAGATTATCGA--GTACAGCTCGCCCGACGAGACC 30405 Query 112434 GCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGT---GGATCCAGAGACAAAG 112490 || ||||| |||||||| || || || || |||| | ||| || | ||| ||| Sbjct 30404 GCCGTGTGCAACCTCGCGTCGATTGCGCTGCCCACCTTTGTCGAGGGCACTACGACCAAG 30345 Query 112491 ACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGA 112550 || | | | | |||||||| || | || ||||| ||||| ||| | Sbjct 30344 ACGTACAACTTCCAGCGTCTCCACGACGTCGCCAAGGTCGTCACGCGCAACCTGAACCGC 30285 Query 112551 GTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGT 112610 | || |||| || | |||||||| ||| | || || || || ||| | ||||| Sbjct 30284 ATCATCGATATCAACTACTACCCCGTCGAGTCGGCGCGCCGCTCCAACATGCGCCACCGC 30225 Query 112611 CCAATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCAT--TCTTTGTCGCCACGCAT 112668 || || ||| |||||||||| |||||||| |||| ||||| || | | || || | | Sbjct 30224 CCGATCGGTATCGGTGTCCAGGGTCTCGCTGATGCGTTCATGATCATGG--GCTACCCCT 30167 Query 112669 TTGATTCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCG 112728 |||| | ||| ||| | | || | || || |||||||| || || ||||| | Sbjct 30166 TTGACAGCCCCGAGGCGCGCCAGCTGAACGTGCAGATCTTTGAGACGATTTACCACGCTG 30107 Query 112729 CTCTTGAG 112736 | || ||| Sbjct 30106 CGCTCGAG 30099 Score = 102 bits (112), Expect = 1e-16 Identities = 116/153 (76%), Gaps = 2/153 (1%) Strand=Plus/Plus Query 102180 GAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCG-C 102238 ||||| || | || || ||| || ||||| |||||||| || || || || |||| | Sbjct 42016 GAGCGCCTGGTGGCGTTCGCGGCCGTGGAGGGCATCTTCTTTTCCGGATCGTT-TGCGTC 42074 Query 102239 TATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTAT 102298 || | |||||| |||||||| || || ||||| ||||| | ||||| |||||||| || Sbjct 42075 GATCTTTTGGCTGAAGAAGCGTGGCCTGATGCCTGGTCTGTCGTTCTCGAACGAGCTGAT 42134 Query 102299 CTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 102331 ||| || ||||||||||| ||| || ||||| Sbjct 42135 CTCGCGGGACGAGGGACTGCACACTGACTTTGC 42167 >seq20 Length=1667054 Score = 87.8 bits (96), Expect = 2e-12 Identities = 212/316 (67%), Gaps = 4/316 (1%) Strand=Plus/Minus Query 16065 GCATCAATCTCATCAATGAAGACGATGCATGGTTG-ATTTTCGCGAGCGACTTCAAAGAG 16123 || ||||||||||| ||||| | ||||| || || ||| | || |||| | Sbjct 931139 GCGTCAATCTCATCGATGAAAATGATGCTCGGCGCCATCTTCTTG-GCAGTAGCAAACAT 931081 Query 16124 ATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGA-AC 16182 || || |||||| | ||| ||||||||||||||||| || || | | | || || Sbjct 931080 GTCACGCACACGCGAAGGGCCGACACCAACAAACATCTCGACGAACTCGGAACCAGACAC 931021 Query 16183 ATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCG 16242 | || | |||||| ||| || || || ||| | || ||| | |||||||||||| | Sbjct 931020 ACTG-AGGAAGGGCACACCAGCCTCGCCAGCAGTAGCCTTGGCAACAAGAGTCTTACCGG 930962 Query 16243 TACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCCACTTCCAAAGTATC 16302 |||| || ||| |||| ||| || || ||||||||||| || | ||||| Sbjct 930961 TACCCGGAGGACCGCTCAGGATGGCGCCACGGGGAATCTTGGCACCGAGACGCTCGTATC 930902 Query 16303 TCTCAGGTTGCTTAAGAAAATCCACAATCTCTTCCAATTCATCTTTGGCGGCGTCAATCC 16362 ||| || ||||| || || |||| ||| | || || ||||| ||| || | Sbjct 930901 GCTCGGGATGCTTGAGGAAGCTGACAAACTCCATAATCTCCTCCTTGGCTTCGTTCATGC 930842 Query 16363 CCTCAACATCGGTAAA 16378 | ||||||||| ||| Sbjct 930841 CAGCAACATCGGCAAA 930826 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620741810294720