Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20cuniculi_20[genbank_20GCA_5F001264635.1_202015-08-11] 76 sequences; 7,459,907 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq40 174 2e-38 seq20 84.2 3e-11 >seq40 Length=46956 Score = 174 bits (192), Expect = 2e-38 Identities = 540/820 (66%), Gaps = 27/820 (3%) Strand=Plus/Plus Query 106506 TGTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGT 106565 ||||||| | ||| ||||| |||| ||| || || || || || | |||||||||| Sbjct 30422 TGTACTCGATAATCTCTGTGCACAGGTTCGAGCTGCGGATGGTGCCGAGGTTCTTTTGGT 30481 Query 106566 TACTCTTTTTGTT-GCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGT 106624 | ||||| |||| ||| ||||||||||| || || |||| | |||||||| |||| Sbjct 30482 TGCTCTTGCTGTTCGCA-GCATCCTTGTACAGAATAAAGGGGTTGCCCGTCTCGATCTGG 30540 Query 106625 GACTTGAGAATTGCCTTCCACA-CATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTC 106683 | || ||| || || | ||||| | | ||| || | ||| || ||||| |||||||| Sbjct 30541 GCCTCGAGGATCGCGTACCACAGCTTTTGCGCCTTG-ACAGTGCGCTTGGCGCGTCCCTC 30599 Query 106684 CGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGG 106743 ||||||| |||||| | || ||||||| || ||| |||||||| || Sbjct 30600 GCGCTCGTACCGCTCGTAGAGCTCCTCGAACTCCTTGCCGTAGCAGTCAGAGAGACCGGG 30659 Query 106744 TGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAG 106803 |||| | | || || | || ||||| | | || ||| || ||||||||||| || Sbjct 30660 GGCCTCGGCGGGGCACATGAGCGACCAGTCTTCGTTCTTCTCGACACGCTTCATGAACAG 30719 Query 106804 GTCTGGAATCCACAGGGATGAAAAGAGATCTC-TACACCGAGCCTCTTCGTCACCTTGGT 106862 || || ||||| || | | || || || | ||| || |||| || | || |||| Sbjct 30720 ATCAGGGATCCAGAGCGCATAGAACAGGTCACGGGCACGGA-CCTCCTCCTTGCCGTGGT 30778 Query 106863 TGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGA 106922 | || | || | |||||| | | || |||||||| ||||| || ||||| || | Sbjct 30779 TCTTGCGCAGATCGATGAACTCAAACACGTCAGCGTGCCAGGGCTCGAGGTAGACAGCAA 30838 Query 106923 TAGATCC------CTT-TCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAAT 106975 | || ||| | | ||||| || | || ||||| || ||| ||| | Sbjct 30839 AGGCACCGGGGCGCTTGTTGCCGCCC----TGGTCGACGTAGCGGGCAGTGTTGTTGTAC 30894 Query 106976 ACGCGAAGCATTGGAATAATACCATCTGAT-TGACCATTTGTCCCCCGAA--TACGAGAT 107032 ||||| ||||| || | ||| || | || | || || || || || |||||| Sbjct 30895 ACGCGGAGCATGGGCACAATGCCGT-TGCTCACGCCGTTCGTGCCGGCAATGTACGAG-- 30951 Query 107033 TTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGC 107092 | |||| | | ||||||| | ||||| || || ||| ||| ||| Sbjct 30952 CCAGTGGCACGGATGCAGTGGATGTTGAGACCAATGCCACCCGCCGTCTTGCTGATCATG 31011 Query 107093 GCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGG 107152 || || | | || || | ||||| || | ||| ||||| ||||| || | ||| Sbjct 31012 GCGCAGGTCTTGAGTGTGTCGTAGATGCCCTCGATCGAGTCGTCCTTCATGCACACGAGG 31071 Query 107153 AAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGA 107212 ||||| ||||||||||| | || || || || |||||||| || || | || ||| Sbjct 31072 AAGCACGACGACATCTGCGGGTTCGGGGTGCCTGCGTTGAAGAGAGTGGGCGACGCATGA 31131 Query 107213 ATGAA--CATACCTTGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCC 107270 | || | | | | ||||| | || ||| ||||| | | | |||||||| | Sbjct 31132 GTAAAGGCCTTC--TCCGACATGTAGTTGTACGTCTCAATCGCGGCCTCAATGTCCGAGC 31189 Query 107271 CGTGGATGCCGATGGCCACACGCATAAACATGTATTGGGG 107310 |||||||||||| ||| |||||||| | ||||| ||||| Sbjct 31190 CGTGGATGCCGACGGCGACACGCATGAGCATGTGCTGGGG 31229 Score = 114 bits (126), Expect = 2e-20 Identities = 335/503 (67%), Gaps = 10/503 (2%) Strand=Plus/Minus Query 116984 CATAGTCCCCAACTCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCA 117043 ||||||| || || || ||| || ||||| | ||| || | || |||||| |||| Sbjct 42457 CATAGTCGCCCACCCGACGCTCGAAAAAGTTCGACTTGCCCTGCAGCGAAATGTTCTCCA 42398 Query 117044 TAAAGTCAAATGGATTCTTCGCGTTCCAAATGGGT-GGCACCCCAACTTGTTTGAGGAGA 117102 ||||||| ||||| ||||| |||| | || | || ||| | || || Sbjct 42397 TAAAGTCGAATGGGTTCTTTGCGTGGTAG-TGCTTCGGGTTCCCGAGCGCCACCAGCAGC 42339 Query 117103 CGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGATTA 117162 || || | ||| |||||||||||| | ||||| | | |||||| ||||| || | Sbjct 42338 CGGTCTGCGACAAACTCAATGTACTGGCACATCAGCCGCGCGTTCATGCCGATCAGCG-A 42280 Query 117163 CATGGG-AGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATGGC 117221 || || || |||||| | | || | | ||||||||| || ||||| | | ||| || Sbjct 42279 CACCGGCAGCGCGTCCGACAAAAAGTCCTGCTCAATCTCCACGGCCTCGGTGATGATCGC 42220 Query 117222 GTGGATAGTTTCGGTAGTGGGTCTATTACGCAAAGTCT-TGAAGAGCTCCACGGCAAACT 117280 | ||| || || ||| | | | | | || |||| ||| ||||| | Sbjct 42219 CTCGATCGTGCTGGG-GTGCGCCCGCTTCTTCAGGTGGCTGAACAGCAGGCATGCAAAGT 42161 Query 117281 CCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGA 117340 | ||| || ||||| || || || || || || || ||||| | || || ||||| | Sbjct 42160 CAGTGTGCAGTCCCTCGTCCCGCGAGATCAGCTCGTTCGAGAACGACAGACCAGGCATCA 42101 Query 117341 GACCCCGCTTCTTCAACCAATAAATAG-CGCAGAATGACCCGGAGAAGAAGATACCCTCC 117399 | || |||||||||| |||| | || | |||| || || ||||| |||||||| |||||| Sbjct 42100 GGCCACGCTTCTTCAGCCAAAAGATCGACGCA-AACGATCCGGAAAAGAAGATGCCCTCC 42042 Query 117400 ACACACGCAAACGCAAAAAGGCGCTCGGCGAAGGA-GCGAGACTTTGTGTCAAACCATTT 117458 || ||| ||||| | |||||||| | |||| ||| | | | || | ||| Sbjct 42041 ACGGCCGCGAACGCCACCAGGCGCTCCGAGAAGCTCGCGCGGCGGTC-GTTGATCCACCG 41983 Query 117459 CATTGCCCATTTCGCCTTCTTCT 117481 || ||||| | ||||||||||| Sbjct 41982 CAGCGCCCACTCCGCCTTCTTCT 41960 >seq20 Length=1667054 Score = 84.2 bits (92), Expect = 3e-11 Identities = 163/238 (68%), Gaps = 2/238 (1%) Strand=Plus/Minus Query 9449 GCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGA-ACATTGGATGAAGGGGACAT 9507 ||| ||||||||||||||||| || || | | | || ||| || | |||||| ||| Sbjct 931062 GCCGACACCAACAAACATCTCGACGAACTCGGAACCAGACACACTG-AGGAAGGGCACAC 931004 Query 9508 TAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGA 9567 || || || ||| | || ||| | |||||||||||| ||||| || ||| | Sbjct 931003 CAGCCTCGCCAGCAGTAGCCTTGGCAACAAGAGTCTTACCGGTACCCGGAGGACCGCTCA 930944 Query 9568 GGAGGGCACCCCGTGGAATCTTGGCGCCACTTCCAAAGTATCTCTCAGGTTGCTTGAGAA 9627 ||| ||| || || ||||||||||| || | ||||| ||| || |||||||| | Sbjct 930943 GGATGGCGCCACGGGGAATCTTGGCACCGAGACGCTCGTATCGCTCGGGATGCTTGAGGA 930884 Query 9628 AATCCACAATCTCTTCCAATTCATCTTTGGCGGCGTCAATCCCCTCAACATCGGTAAA 9685 | |||| ||| | || || ||||| ||| || || ||||||||| ||| Sbjct 930883 AGCTGACAAACTCCATAATCTCCTCCTTGGCTTCGTTCATGCCAGCAACATCGGCAAA 930826 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589980239518240