Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20cuniculi_20[genbank_20GCA_5F001264635.1_202015-08-11] 76 sequences; 7,459,907 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq39 105 5e-18 seq75 93.3 3e-14 seq2 82.4 6e-11 >seq39 Length=522589 Score = 105 bits (116), Expect = 5e-18 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || || | ||| | ||| ||||||||||| || || || ||||| ||| ||| | ||| Sbjct 30019 AGACGGAGCACGAGATGGAGCGTGCTCTCCTTCTGGATGTTGTAGTCACTCAGAGTACGA 29960 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 |||| |||| ||||||||||||||| || || |||||||| |||| ||| | |||||| Sbjct 29959 CCGTCCTCCAGCTGCTTACCGGCAAAGATAAGACGCTGTTGGTCCGGGGGGATACCCTCC 29900 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| ||||| || || | | | || |||| || || |||| || Sbjct 29899 TTGTCCTGGATCTTGCTCTTGACGTTTTCGATCGTGTCAGACGATTCGACTTCCAGAGTG 29840 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 ||||| || || || | || || ||||| | |||||| Sbjct 29839 ATCGTCTTGCCAGTGAGGGTCTTGACAAAGACCTGCAT 29802 Score = 95.1 bits (104), Expect = 9e-15 Identities = 145/207 (70%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 48564 TGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGC 48623 || || |||||||| || || || ||||| || || | || |||| || | |||| Sbjct 29776 TGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTGAGCGTGCGGCCGTCCTCAAGCTGC 29717 Query 48624 TTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTT 48683 || |||||||| ||||| |||||||| |||| |||| |||||||||||| ||||| Sbjct 29716 TTGCCGGCAAAGATCAGGCGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATCTTG 29657 Query 48684 TGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTC 48743 || || | | | || || | ||| || || | ||| || || ||||| || Sbjct 29656 CTCTTGACGTTGTCGATTGTGTCCGAGGACTCGACTTCGAGCGTGATAGTCTTTCCAGTA 29597 Query 48744 AAAGTTTTTACAAAAATCTGCATCGTG 48770 | ||| |||||||| || ||||| ||| Sbjct 29596 AGAGTCTTTACAAAGATTTGCATTGTG 29570 Score = 91.5 bits (100), Expect = 1e-13 Identities = 86/110 (78%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 48564 TGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGC 48623 || ||||||||||| || || || ||||| ||| ||| | || |||| |||| |||| Sbjct 30460 TGGAGCGTGCTCTCCTTCTGGATGTTGTAGTCACTCAGAGTACGGCCGTCCTCCAGCTGC 30401 Query 48624 TTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTC 48673 || |||||||| || || |||||||| |||| ||| | ||||||||||| Sbjct 30400 TTGCCGGCAAAGATAAGACGCTGTTGGTCCGGGGGGATACCCTCCTTGTC 30351 Score = 82.4 bits (90), Expect = 6e-11 Identities = 84/110 (76%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 48564 TGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGC 48623 || || |||||||| || || || ||||| || || | || |||| || | |||| Sbjct 30232 TGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTGAGCGTGCGGCCGTCCTCAAGCTGC 30173 Query 48624 TTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTC 48673 || |||||||| ||||| |||||||| |||| |||| |||||||||||| Sbjct 30172 TTGCCGGCAAAGATCAGGCGCTGTTGGTCCGGAGGAATGCCCTCCTTGTC 30123 >seq75 Length=115788 Score = 93.3 bits (102), Expect = 3e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 48538 CGCCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAG 48597 |||| || | || || | ||| | ||| ||||||||||| || || ||||| || ||| Sbjct 54546 CGCCACCACGGAGACGGAGCACTAGATGGAGCGTGCTCTCCTTCTGGATATTATAGTCAC 54605 Query 48598 ATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGG 48657 || | || | || || | ||||| || ||||| ||||| ||||||||||||| || Sbjct 54606 TGAGGGTGCGGCCATCCTCTAGTTGCTTGCCTGCAAAGATCAGACGCTGTTGATCCGGGG 54665 Query 48658 GAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCA 48717 ||| |||||||||||| ||||| || || | | | || || | ||| | Sbjct 54666 GAATGCCCTCCTTGTCCTGGATCTTGCTCTTGACGATGTCAATGGTATCGGAGGACTCGA 54725 Query 48718 CCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 |||| | || || || || || || | ||| || ||||| | |||||| Sbjct 54726 CCTCGAGAGTGATTGTCTTGCCGGTAAGAGTCTTGACAAAGACCTGCAT 54774 >seq2 Length=94478 Score = 82.4 bits (90), Expect = 6e-11 Identities = 149/218 (68%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || |||| ||| | || || |||||||| || || || ||||| || || | || Sbjct 13087 AGACGCAGCACAAGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTAAGGGTGCGG 13146 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || || | |||||| |||||||| ||||| |||||||| |||| ||| | |||||| Sbjct 13147 CCATCCTCGAGCTGCTTGCCGGCAAAGATCAGGCGCTGTTGGTCCGGGGGGATACCCTCC 13206 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| |||||| || || | | || || || | ||||||||| | || Sbjct 13207 TTGTCCTGGATCTTTCCCTTGACGTTCTCGATAGTGTCGGAAGACTCCACCTCAAGGGTG 13266 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || || ||||| | || || || || | ||||| Sbjct 13267 ATAGTCTTCCCCGTGAGGGTCTTGACGAAGACTTGCAT 13304 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380937247156548