Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20cuniculi_20[genbank_20GCA_5F001264635.1_202015-08-11] 76 sequences; 7,459,907 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq40 255 1e-62 >seq40 Length=46956 Score = 255 bits (282), Expect = 1e-62 Identities = 745/1120 (67%), Gaps = 38/1120 (3%) Strand=Plus/Plus Query 221360 GGACTCCCATCGTACGACTCGTAGGGACCGTACAGTTCGGCCTGGGCGCAAGACTGCGTC 221419 || || || ||||| | |||||||| |||||| | ||||| | |||| || || Sbjct 30043 GGGCTGCCCTCGTATGTCTCGTAGGTGCCGTACTGCTCGGCAAGCTCGCACGAGCGCTCG 30102 Query 221420 AGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTG-GCCTCGGGAGA 221478 || ||||||||||| || |||||||||||| | ||| || || | |||||||| | Sbjct 30103 AGCGCAGCGTGGTAAATCGTCTCAAAGATCTGCACGTTCAG-CTGGCGCGCCTCGGG-GC 30160 Query 221479 AGTGAAGGGCATA-CGCAGCATC-TGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCG 221536 || || || || | || ||| |||| | | || || || ||||| || ||||||||| Sbjct 30161 TGTCAAAGGGGTAGCCCATGATCATGAACG-CATCAGCGAGACCCTGGACACCGATACCG 30219 Query 221537 ATGGGCCTGTGTCTCCTGTTGGAAGCGGC-CGCTT-CTGGCACGGGATAAAAGTTGACGT 221594 || || | ||| | | ||||||| ||||| ||| || | ||||| || |||||| | Sbjct 30220 ATCGGGCGGTGGCGCATGTTGGA-GCGGCGCGCCGACTCG-ACGGGGTAGTAGTTGATAT 30277 Query 221595 CGATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGAT 221654 |||| | ||| ||||| | |||| ||| || | || ||| || |||| | Sbjct 30278 CGATGATGCGGTTCAGGTTGCGCGTGACGACCTTGGCGACGTCGTGGAGACGCTGGAAGT 30337 Query 221655 TGAACACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGCTGG 221714 || || | | | ||||| | | | | ||||| | | || |||| | Sbjct 30338 TGTACGTC---TTG-----GTCGTAGTGCCCT-CGACAAAGGTGGGCAGCGCAATCGACG 30388 Query 221715 CCAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGGT 221774 | ||||| |||||||| |||||| | | |||| || |||||||| || |||| Sbjct 30389 CGAGGTTGCACACGGCGGTCTCGTCGGGCGAGCTGTACTCGATAATCTCTGTGCACAGGT 30448 Query 221775 T---GCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCT 221831 | ||||| |||||| || |||| || || || ||||| || ||||| |||| Sbjct 30449 TCGAGCTGCG---GATGGTGCCGAGGTTCTTTTGGTTGCTCTTGCTGTTCGCAGCATCCT 30505 Query 221832 TGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTT 221891 |||| || |||||||| ||| ||||| | ||| ||| | || ||| || ||| || Sbjct 30506 TGTACAGAATAAAGGGGTTGCCCGTCTCGATCTGGGCCTCGAGGATCGCGTACCACAG-- 30563 Query 221892 CTCTGGCGC--TCACCGTCCTCTTGACTGCACCCTCGGTCTTTTCATACCCGGTATAGAG 221949 || | |||| | || || | |||| | |||||| || | |||| ||||| Sbjct 30564 CTTTTGCGCCTTGACAGTGCGCTTGGCGCGTCCCTCGCGCT---CGTACCGCTCGTAGAG 30620 Query 221950 CATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACATCAG 222009 | || |||| | ||||| || || || || | |||||| ||||| || Sbjct 30621 CTCCTCGAACTCCTTGCCGTAGCAGTCAGAGAGACCGGGGGCCTCGGCGGGGCACATGAG 30680 Query 222010 ACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTG 222069 ||||| | ||| | | ||| | || |||||| || || |||||||| ||||| | Sbjct 30681 CGACCAGTCTTCGTTCTTCTCGACACGCTTCATGAACAGATCAGGGATCCAGAGCGCATA 30740 Query 222070 AAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTC 222129 || || || | || || ||||||| ||||| ||| || | |||||| | ||||| Sbjct 30741 GAACAGGTCACGGGCACGGACCTCCTCCTTGCCGTGGTTCTTGCGCAGATCGATGAACTC 30800 Query 222130 AAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCC 222189 ||| | |||||||||||| ||||| || ||||| || | || ||||| ||||||||||| Sbjct 30801 AAACACGTCAGCGTGCCAGGGCTCGAGGTAGACAGCAAAGGCACCGGGGCGCTTGTTGCC 30860 Query 222190 ACCCTGATCCACCATCCTCTCCAGAG-CGTTGAAGATGCGAAGGGTCGGTACCAGTCCGT 222248 ||||| || | | | ||| | |||| | | ||| || | || || | |||| Sbjct 30861 GCCCTGGTCGA-CGTAGCGGGCAGTGTTGTTGTACACGCGGAGCATGGGCACAATGCCGT 30919 Query 222249 TGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTACTGGCAG-AC 222307 || ||||| ||||| |||||||| || ||| | | | | ||| | Sbjct 30920 TGCTCACGCCGTTCGTGCCGGCAATGTACGAGCCAGTGGCACGGATG-CAGTGGATGTTG 30978 Query 222308 ATGCCGATACCA-CCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGAT 222366 | || || ||| ||| ||| || | ||||||||||||| ||||||| ||||| ||| Sbjct 30979 AGACCAATGCCACCCGCCGTCTTGC-TGATCATGGCGCAGGTCTTGAGTGTGTCGTAGAT 31037 Query 222367 GCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGATTTGGT 222426 |||||| || ||||| ||||| | | || || || || ||||||||||| | || | Sbjct 31038 GCCCTCGATCGAGTCGTCCTTCATGCACACGAGGAAGCACGACGACATCTGCGGGTTCGG 31097 Query 222427 GGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAG 222466 || | ||||| || || ||||| || || |||||| Sbjct 31098 GGTGCCTGCGTTGAAGAGAGTGGGCGACGCATGAGTAAAG 31137 Score = 219 bits (242), Expect = 8e-52 Identities = 564/858 (66%), Gaps = 24/858 (3%) Strand=Plus/Plus Query 25474 GATATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGAT 25533 || || ||| || | ||||||||||| | || |||||||||||| ||||| || Sbjct 41611 GAGATCTGGCAGTTCTACAAGAAGGCCGAGGCGTCGTTCTGGACCGCCGAGGAGATCGAC 41670 Query 25534 CTGGCCAAGGACATGGACGGCTGGTACGCTCTATCCAAAGAC---GAGCAGCATTTTCTC 25590 ||| ||||||| || ||| |||| || | || ||| |||| || ||| || Sbjct 41671 CTGAGCAAGGACCTGCACGACTGGGACAACCGGCTGAACGACAATGAGCGCCACTTTATC 41730 Query 25591 AAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAG 25650 | | ||| |||| |||||||| || || || || || ||||||||||| ||| ||| Sbjct 41731 AGCCATGTGCTGGCGTTCTTTGCCGCGTCGGACGGCATTGTGAACGAGAACCTGCTGGAG 41790 Query 25651 AGATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCC 25710 | ||| | | || |||||| || ||||| || |||||||| |||||||| Sbjct 41791 CGCTTCTCGACCGAGGTGCAGGCCGCCGAGGCGCGCTGCTTCTACGGCTTCCAGATCATG 41850 Query 25711 ATCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATG---ACGTACATTACAGAC 25767 || || ||| | ||||| ||| ||| | ||| ||||| ||||| || || Sbjct 41851 ATGGAGAATATCCACTCGGAGACGTACTC---GCTGCTGATCGACACGTATATCCGCGAG 41907 Query 25768 GTCGCCGAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAG 25827 || || | || ||||||| || |||||| || || | |||| |||| Sbjct 41908 CCCGAGCAGCGCGAGTACCTGTTTGACGCGATCGAGACGATCCCGGTGGTGAAGAAGAAG 41967 Query 25828 GCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTA 25887 ||| |||||| || |||||||||| || |||| | || ||||| ||||| Sbjct 41968 GCGGAGTGGGCGCTGCGGTGGATCAACGACCGCCGCGCGAGCTTCTCGGAGCGCCTGGTG 42027 Query 25888 GCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTC 25947 || || || || |||||||||||||| || ||| ||||||||| | ||||| ||||| Sbjct 42028 GCGTTCGCGGCCGTGGAGGGCATCTTCTTTTCCGGATCGTTTGCGTCGATCTTTTGGCTG 42087 Query 25948 AAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAG 26007 ||| || || ||||| || |||| || || |||||||| ||| |||||||| Sbjct 42088 AAGAAGCGTGGCCTGATGCCTGGTCTGTCGTTCTCGAACGAGCTGATCTCGCGGGACGAG 42147 Query 26008 GGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAAACCTTCT 26067 || || |||| || ||||| |||||||| | || ||||| || | || | | Sbjct 42148 GGACTGCACACTGACTTTGCATGCCTGCTGTTCA---GCCAC---CTGAAGAAGCGGGCG 42201 Query 26068 CA--AGAG-ACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGTTTCNN 26124 || || || || | ||||||| ||||| |||||||| ||| |||| ||| Sbjct 42202 CACCCCAGCACGATCGAGGCGATCATCACCGAGGCCGTGGAGATTGAGCAGGACTTTTTG 42261 Query 26125 NNNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATGAGCCAATACATT 26184 | ||||||||| | || ||| |||| |||||| Sbjct 42262 TCGGACGCGCTGCCGGTGTCGCTGATCGGCATGAACGCGCGGCTGATGTGCCAGTACATT 42321 Query 26185 GAGTATGTGGCCGACCATCTGCT-GTGCCAGCTGGGACTCGCCAGACTCTACAGTACGC- 26242 |||| ||| || |||| ||||| ||| | ||| || | | | | |||| |||| Sbjct 42322 GAGTTTGTCGCAGACCGGCTGCTGGTGGC-GCTCGGGAACCCGAAGCACTAC--CACGCA 42378 Query 26243 -CTAACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTTCTTTGAA 26301 ||||| |||||||||||||| ||||| ||| || | || ||| | ||||| || || Sbjct 42379 AAGAACCCATTCGACTTTATGGAGAACATTTCGCTGCAGGGCAAGTCGAACTTTTTCGAG 42438 Query 26302 AAGAGGGTCGGCGACTAT 26319 |||| ||||||||| Sbjct 42439 CGTCGGGTGGGCGACTAT 42456 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928843917597440