Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20cuniculi_20[genbank_20GCA_5F001264635.1_202015-08-11] 76 sequences; 7,459,907 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq20 131 5e-25 seq40 122 3e-22 seq63 118 3e-21 >seq20 Length=1667054 Score = 131 bits (144), Expect = 5e-25 Identities = 263/388 (68%), Gaps = 4/388 (1%) Strand=Plus/Plus Query 302491 TCAATTCCGTCATCGCCGTAGGAATACTGAATGATTTTGTTCTTGTTATTTCTTACGGTC 302550 ||||| || ||||||||||| | | ||| || | |||||| | || | || || Sbjct 591495 TCAATGCCATCATCGCCGTATGCAAACTCGATCACATTGTTCGTCGAGTTGCGGACCGTT 591554 Query 302551 ATATCATAACCAATCATAATGTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCA 302610 ||||| | ||| ||| || || | ||||| | ||||||||| ||||||||| Sbjct 591555 CCGTCATAGCAGATCGTAACATCCTCGAGCGCCTTGACCAGACGACGCTGGATATAACCA 591614 Query 302611 GTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAG 302670 || | || || || || || ||||| ||||| ||||||| |||| || |||||| Sbjct 591615 GTCTCGGCAGTCTTGACCGCAGTGTCAATCAGACCCTCACGACCGGCCATTGCGTGGAAG 591674 Query 302671 AATAGCTCTTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCG 302730 || | ||| | | || || | | | | ||| |||| || || ||||| |||| Sbjct 591675 AAGAACTCGTGTGCAGTGAGTCCACGGAGATACGAGTTCTCCACAAAGCCACGGCTCTCG 591734 Query 302731 GGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATA 302790 |||| | |||| |||||||||||| ||||| |||| || | ||| | || || Sbjct 591735 GGCGTAAAGTCGTCCTTGGTAAAGTGCGGCAGCGTCCGGTGACGGAAACCGAACGGAATG 591794 Query 302791 CGCTTTCCATCAACGTTCTGCTGTCCCAGGCACGAAATCATCTGCGAAATATT--TAAAT 302848 ||||| || || || ||||||| || | || | | ||| || ||||| || ||||| Sbjct 591795 CGCTTACCCTCCACACTCTGCTGGCCGACACATGCAGACATTTGAGAAATGTTAATAAAT 591854 Query 302849 CACTGCCCTTGGAGCCAGCATTTACCAT 302876 | ||||||||||| ||| | ||||| Sbjct 591855 GA--ACCCTTGGAGCCGGCAATAACCAT 591880 >seq40 Length=46956 Score = 122 bits (134), Expect = 3e-22 Identities = 587/925 (63%), Gaps = 25/925 (3%) Strand=Plus/Plus Query 155587 CAATAGACGCCAGATTACATACCGCAGTCTCCTTGTCGTCGCTGTATTCTACAATCTCAC 155646 |||| ||||| || || || || || ||||| | | |||||| || | |||||| Sbjct 30380 CAATCGACGCGAGGTTGCACACGGCGGTCTCGTCGGGCGAGCTGTACTCGATAATCTCTG 30439 Query 155647 AGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTGTTACAAG 155706 ||||||||| || || ||||||||| | ||||| ||||| || ||||| || Sbjct 30440 TGCACAGGTTCGAGCTGCGGATGGTGCCGAGGTTCTTTTGGTTGCTCTTGCTGTTCGCAG 30499 Query 155707 CATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAATCTTTAGCC 155766 |||||||||| ||||| | ||| | || ||||| ||||| || || || ||| || Sbjct 30500 CATCCTTGTACAGAATAAAGGGGTTGCCCGTCTCGATCTGGGCCTCGAGGATCGCGTACC 30559 Query 155767 AGAGGTCACGGGCATT---AATTTGCTTGTTGTATCTGCCTTCCGACTCATATTTCATAT 155823 | || | | || || | | ||||| | || ||| || ||| || | | Sbjct 30560 ACAGCTTTTGCGCCTTGACAGTGCGCTTGGCGCGTC--CCTCGCG-CTCGTACCGCTCGT 30616 Query 155824 ACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGGCACTTATCGGGGCAAA 155883 | ||| | | |||| ||||| || ||| || || ||| || ||||||| | Sbjct 30617 AGAGCTCCTCGAACTCCTTGCCGTAGCAGTCAGAGAGACCGGGGGCCTCGGCGGGGCACA 30676 Query 155884 ACAGCGACCAAATT---TTATTACCGATTACACGCTCCATAAATACATCACTCGCCCAAA 155940 |||||||| | || || || ||||||| ||| || | |||| ||| | Sbjct 30677 TGAGCGACCAGTCTTCGTTCTTCTCG---ACACGCTTCATGAACAGATCAGGGATCCAGA 30733 Query 155941 TAGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGTGATTCTTCCGTAGCTCTA 156000 |||||||| ||||| | || |||||| | |||||| ||||| || || || | Sbjct 30734 GCGCATAGAACAGGTCACGGGCACGGACCTCCTCCTTGCCGTGGTTCTTGCGCAGATCGA 30793 Query 156001 AGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAACTACC---ATTCC 156057 ||| || | |||| || ||||| || || | |||||| ||| | Sbjct 30794 TGAACTCAAACACGTCAGCGTGCCAGGGCTCGAGGTAGACAGCAAAGGCACCGGGGCGCT 30853 Query 156058 TCTTGCCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGAATAA 156117 | ||||| ||||| || || || || ||||| || ||| | || | ||||| || | || Sbjct 30854 TGTTGCCGCCCTGGTCGACGTAGCGGGCAGTGTTGTTGTACACGCGGAGCATGGGCACAA 30913 Query 156118 TACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGAACATTATGAA 156177 | || ||| ||| || || ||| ||| | ||| |||| | || | || | Sbjct 30914 TGCCGTTGCTCACGCCGTTCGTGCCGGCAATGTACGAGCCAGTGGCACGGATGCAGTGGA 30973 Query 156178 TATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTTACAGTATTGA 156237 | | || ||||| ||||| | | || || ||||| ||| | || | | Sbjct 30974 TGTTGAGACCAATGCCACCCGCCGTCTTGCTGATCATGGCGCAGGTCTTGAGTGTGTCGT 31033 Query 156238 AAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGA--ACTTAATTGAGG 156295 | || || || || || || || | ||| | | || ||||||| || | | | Sbjct 31034 AGATGCCCTCGATCGAGTCGTCCTTCATGCACACGAGGAAGCACGACGACATCTGCGGGT 31093 Query 156296 TCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACTTATTAGACAT 156355 ||| |||| || |||||||| || || || | |||||| |||| ||| | ||||| Sbjct 31094 TCGGGGTG--CCTGCGTTGAAGAGAGTGGGCGACGCATGAGTAAAGGCCTTCTCCGACAT 31151 Query 156356 ATAATCGTATGTCTCCTTAATC---TTCTCAAGATTAGACCCGTGAATACAGATAGAGAC 156412 || | ||| ||||| |||| ||||| | || ||||| || | || | ||| Sbjct 31152 GTAGTTGTACGTCTC---AATCGCGGCCTCAATGTCCGAGCCGTGGATGCCGACGGCGAC 31208 Query 156413 CCTCATCCACATATGCTGAGGACGCTCTACAATCACTCCATCAATTCGCAGAAGGTATGC 156472 | ||| ||| ||||| || ||||| ||| | || | ||| ||||| || || | Sbjct 31209 ACGCATGAGCATGTGCTGGGGGCGCTCGGCAACCTTGCCGTTAATGCGCAGCAGATAAGA 31268 Query 156473 GCGTTCCAGAGTTTTAAACCCGAAA 156497 ||| || ||||| || || |||||| Sbjct 31269 GCGCTCAAGAGTCTTGAAACCGAAA 31293 >seq63 Length=730213 Score = 118 bits (130), Expect = 3e-21 Identities = 176/248 (71%), Gaps = 4/248 (2%) Strand=Plus/Plus Query 251408 TAAGACCACACTTATTACACACATGGACGCTGTAAGCATCAGATGCGTCATATAGCCGAC 251467 |||||||||| | || | ||||| || ||| |||||| ||| || || | || Sbjct 133608 TAAGACCACAGACGTCGCAGATATGGAGGCGGTATGCATCACTTGCATCGTACATGCGCT 133667 Query 251468 CCTTGGTGAAGCGAG--ATGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAA 251525 ||||| |||| | |||| |||| ||||||||||| || |||||||| |||||||| Sbjct 133668 CCTTGAGGAAGTTGGCCATGC--CGTGCGAAATCATACAGTCGCGCTCCATCTCACCGAA 133725 Query 251526 ACGAAGACCACCATCGCGAGCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGG 251585 ||| |||||||| || || | | |||||| ||||||| ||||| || | | ||| Sbjct 133726 ACGCAGACCACCGTCACGCGAACGACCCTCCACAGGCTGGCGAGTCAGGATCTGGACAGG 133785 Query 251586 ACCGATGGAGCGGCTATGTTGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGC 251645 ||| || || || ||| || | ||||| |||||||||||||||||| | | Sbjct 133786 ACCACGGGCACGTGAGTGGATCTTGTCGTCGACCATGTGCTTGAGACGCTGGTAGTAGGT 133845 Query 251646 GGGACCGA 251653 ||| |||| Sbjct 133846 GGGGCCGA 133853 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471816166817612