Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20cuniculi_20[genbank_20GCA_5F001264635.1_202015-08-11] 76 sequences; 7,459,907 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq40 176 4e-39 seq39 109 5e-19 seq2 86.0 6e-12 >seq40 Length=46956 Score = 176 bits (194), Expect = 4e-39 Identities = 603/930 (65%), Gaps = 20/930 (2%) Strand=Plus/Plus Query 138508 ACCTGAAATTCACCGGCCAATACTCGACGAACGTAAATGTTGTTGGTGAAAGGCTCAAAC 138567 ||||| || || ||||| | || || || | |||||||||| ||||| | |||||||| Sbjct 29815 ACCTGGAACTCGCCGGCGAGCACACGGCGCATGTAAATGTTGCTGGTGTATGGCTCAAAG 29874 Query 138568 GATTCGTTGTTTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCATGTACGCCACCAAAAGA 138627 | ||||| || |||||||| ||| | |||||| ||||| || | || || Sbjct 29875 CACTCGTTAAAGCCGAGAATCTGGCTCGTCGACGCGGTGGGCATCGGGGCGAGCAGCAGC 29934 Query 138628 GAATTCCGTAAACCGTGAAGCTTGATTCGTTCCTTGAGCGACGACCAGTCCCACAAATCG 138687 || || || | ||||| || || |||||||||| | ||||||||| | || Sbjct 29935 GAGTTACGCAGGCCGTGCTGCGCAATCTTGGCCTTGAGCGAGGCCCAGTCCCAGAGGTCC 29994 Query 138688 CTAGGTTTTTTGTTCCACATATCGTACTGTAACATTCCCAAACTTGCGGGACTGCCTTCG 138747 | || | ||||||||| |||||||| | || ||| || || || ||||| ||| Sbjct 29995 GTGGGAGTACGGTTCCACATGTCGTACTGCAGAATGCCCTGGCTCGCAGGGCTGCCCTCG 30054 Query 138748 TACGAATCGTATACACCAAACTCTTGCGCCAACTCGTTGCTCGC-CTCGAGCGCACCATA 138806 || | ||||| || ||| | || | |||| | || |||||||||| | | Sbjct 30055 TATGTCTCGTAGGTGCCGTACTGCTCGGCAAGCTCGCA-CGAGCGCTCGAGCGCAGCGTG 30113 Query 138807 GTAAATAGTTTCGGCAATCTGCTGATTGAGCAATCGGGCCTCGGCGCTCTCGTACGGCAT 138866 |||||| || || |||||| || ||| || ||||||| ||| || | || Sbjct 30114 GTAAATCGTCTCAAAGATCTGCACGTTCAGCTGGCGCGCCTCGGGGCTGTCAAAGGGGTA 30173 Query 138867 GCGGAGCATCGTGAACGCGTCGGCCAGCCCTTGCACGCCCACTCCGACAGGGCGATGGCG 138926 || | ||| ||||||| || || || || || || || | |||| ||||| ||||| Sbjct 30174 GCCCATGATCATGAACGCATCAGCGAGACCCTGGACACCGATACCGATCGGGCGGTGGCG 30233 Query 138927 CAGATTTGA----CGCTTTTGCGGCTTCGATAGGATAATAGTTTACATCGATGATTTTGT 138982 || || || ||| || | |||| || || ||||| | ||||||||| || Sbjct 30234 CATGTTGGAGCGGCGC----GCCGACTCGACGGGGTAGTAGTTGATATCGATGATGCGGT 30289 Query 138983 TTAAATTTCGCACGACCACCTTAGTCGTATGCTTTAATCGTTCAAAATCGTATGTGCCCC 139042 | | || ||| ||| ||||| | | | | || | || | ||| || Sbjct 30290 TCAGGTTGCGCGTGACGACCTTGGCGACGTCGTGGAGACGCTGGAAGTTGTACGT----- 30344 Query 139043 CGTTGTCGTCGACGACGTCGACAAATTTGTTGACACAAATCGAGGCTATGTTGCACACCG 139102 | | ||||| | | | |||||||| || | |||||| || | ||||||||| | Sbjct 30345 CTTGGTCGTAGT-GCCCTCGACAAAGGTGGGCAGCGCAATCGACGCGAGGTTGCACACGG 30403 Query 139103 CCACTTCGTCGGGGTCGCTGTATTCGACAATTTCGGCACACAAATTACTACACTTGATCG 139162 | |||||||| |||||| |||| ||| || | |||| || | ||| | Sbjct 30404 CGGTCTCGTCGGGCGAGCTGTACTCGATAATCTCTGTGCACAGGTTCGAGCTGCGGATGG 30463 Query 139163 TACCTAAATTTTGTTGATTGCTTTTTCGGTTACAAGCATCTTTGTAAAGCATATACGGTG 139222 | || | || | ||| ||||| || | ||| |||||| ||||| || ||| | || Sbjct 30464 TGCCGAGGTTCTTTTGGTTGCTCTTGCTGTTCGCAGCATCCTTGTACAGAATAAAGGGGT 30523 Query 139223 TGCCAGTTTCCACTTGTGTCTCTATAATGAATTTGAACAAGTCCCTAGC-TTGTATTTGA 139281 |||| || || | || | ||| | || | ||| | || ||| || Sbjct 30524 TGCCCGTCTCGATCTGGGCCTCGAGGATCGCGTACCACAGCTTTTGCGCCTTGACAGTG- 30582 Query 139282 CGCACGTAAAGTTCGTCGCGCTCGTACTTTTCGTAGAGTTCGTCGAA-TCGTTCACCGTA 139340 ||| | || | |||||||||||| |||||||| || ||||| || || ||||| Sbjct 30583 CGCTTGGCGCGTCCCTCGCGCTCGTACCGCTCGTAGAGCTCCTCGAACTCCTT-GCCGTA 30641 Query 139341 GGCGTCAGAAAGATCGCGACACTTGTCAGGACACATGAGCGACCATACGCCGTTCGCCTT 139400 | |||||| ||| || | || | | || |||||||||||||| | ||||| || Sbjct 30642 GCAGTCAGAGAGACCGGGGGCCTCGGCGGGGCACATGAGCGACCAGTCTTCGTTCTTCTC 30701 Query 139401 GACGCGCCTCATGAACAGATCCGGAATCCA 139430 ||| ||| ||||||||||||| || ||||| Sbjct 30702 GACACGCTTCATGAACAGATCAGGGATCCA 30731 >seq39 Length=522589 Score = 109 bits (120), Expect = 5e-19 Identities = 119/158 (75%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 24701 ACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCC 24760 || ||||| |||||| | || || || || || || ||||| ||||||||||| || || Sbjct 29571 ACAATGCAAATCTTTGTAAAGACTCTTACTGGAAAGACTATCACGCTCGAAGTCGAGTCC 29630 Query 24761 ACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGAT 24820 | |||||| | || | || || |||||||| ||||| || || || ||||| || Sbjct 29631 TCGGACACAATCGACAACGTCAAGAGCAAGATCCAGGACAAGGAGGGCATTCCTCCGGAC 29690 Query 24821 CAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGA 24858 ||||| || ||||||||||||| || ||||| ||||| Sbjct 29691 CAACAGCGCCTGATCTTTGCCGGCAAGCAGCTTGAGGA 29728 Score = 109 bits (120), Expect = 5e-19 Identities = 117/155 (75%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||| ||||| | || || || || || || ||||| ||||||||||| || || | Sbjct 30258 ATGCAGGTCTTTGTCAAGACCCTTACTGGCAAGACTATCACGCTCGAAGTTGAGTCCTCG 30317 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | |||| || || |||||||| ||||| || || || || || || ||| Sbjct 30318 GACACGATCGAAAACGTCAAGAGCAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAA 30377 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGA 24858 || ||| | ||||||||||| || ||||||||||| Sbjct 30378 CAGCGTCTTATCTTTGCCGGCAAGCAGCTGGAGGA 30412 Score = 104 bits (114), Expect = 2e-17 Identities = 116/155 (75%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||| | || | || || || || || || ||||| ||||||||||| || || | Sbjct 30030 ATGCAGGTGTTCGTCAAGACCCTTACTGGCAAGACTATCACGCTCGAAGTCGAGTCCTCG 30089 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 |||||| | |||| || || |||||||| ||||| || || || ||||| || ||| Sbjct 30090 GACACAATCGAAAACGTCAAGAGCAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCAA 30149 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGA 24858 || || ||||||||||||| || ||||| ||||| Sbjct 30150 CAGCGCCTGATCTTTGCCGGCAAGCAGCTTGAGGA 30184 Score = 95.1 bits (104), Expect = 1e-14 Identities = 114/155 (74%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||| ||||| | || || || || || || || || || || ||||| ||| | | Sbjct 29802 ATGCAGGTCTTTGTCAAGACCCTCACTGGCAAGACGATCACTCTGGAAGTCGAATCGTCT 29861 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | |||| || || |||||||| ||||| || || || || || || ||| Sbjct 29862 GACACGATCGAAAACGTCAAGAGCAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAA 29921 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGA 24858 || ||| | ||||||||||| || ||||||||||| Sbjct 29922 CAGCGTCTTATCTTTGCCGGTAAGCAGCTGGAGGA 29956 >seq2 Length=94478 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| |||| | || || || || || || ||||| || || || || || | || Sbjct 13304 ATGCAAGTCTTCGTCAAGACCCTCACGGGGAAGACTATCACCCTTGAGGTGGAGTCTTCC 13245 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || ||||||||| ||||| || || || || || || ||| Sbjct 13244 GACACTATCGAGAACGTCAAGGGAAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAA 13185 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || ||||||||||||| || ||||| |||||| | | | | || || ||| Sbjct 13184 CAGCGCCTGATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTTAGCGACTACAAC 13125 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || || ||||| || || ||| | ||| |||| |||| || || Sbjct 13124 ATCCAGAAGGAGAGCACTCTCCACCTTGTGCTGCGTCTGCGTGGTGG 13078 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449897172597280