Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20cuniculi_20[genbank_20GCA_5F001264635.1_202015-08-11] 76 sequences; 7,459,907 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq58 131 1e-25 seq2 125 5e-24 seq39 116 2e-21 seq75 109 4e-19 >seq58 Length=446738 Score = 131 bits (144), Expect = 1e-25 Identities = 159/214 (74%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| ||||| | |||||||||||||| ||||| ||||| || |||| | || Sbjct 376251 AGGACGAGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTAAGAGTGCGACCGTCC 376192 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| |||||||| |||| || || ||||| | || | ||||||||||| Sbjct 376191 TCGAGCTGCTTGCCGGCGAAAATCAACCGCTGTTGGTCCGGAGGAATACCCTCCTTGTCC 376132 Query 34886 TTTATTTTTTGTTTGACGGATG-CTATCGATTCATTGGCCTCGACATCAACGGTTATGGT 34944 | || || |||||| ||| | |||| || || | |||||| |||| || || || Sbjct 376131 TGAATCTTAGACTTGACG-ATGTCGATCGTGTCGTTCGACTCGACCTCAAGAGTGATCGT 376073 Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 ||| |||||||| ||||| || |||||||||||| Sbjct 376072 CTTGCCCGTGAGTGTCTTGACGAAGATCTGCATG 376039 >seq2 Length=94478 Score = 125 bits (138), Expect = 5e-24 Identities = 156/214 (73%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824 ||| || ||||| | |||||||||||||| ||||| ||||| ||| |||| |||| Sbjct 13092 CAGCACAAGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTAAGGGTGCGGCCATC 13151 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 || || ||||| ||||| |||||||| || || ||||| | || | ||||||||||| Sbjct 13152 CTCGAGCTGCTTGCCGGCAAAGATCAGGCGCTGTTGGTCCGGGGGGATACCCTCCTTGTC 13211 Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGT 34944 | || ||| |||||| | || | || | ||| || |||| ||| || || Sbjct 13212 CTGGATCTTTCCCTTGACGTTCTCGATAGTGTCGGAAGACTCCACCTCAAGGGTGATAGT 13271 Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 ||| |||||||||||||| || |||| |||||| Sbjct 13272 CTTCCCCGTGAGGGTCTTGACGAAGACTTGCATG 13305 >seq39 Length=522589 Score = 116 bits (128), Expect = 2e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || || ||||||| |||||||||||||| ||||| ||||| || |||| | || Sbjct 29785 AGAACAAGGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTGAGCGTGCGGCCGTCC 29726 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| ||||| |||||||| || || ||||| | || | ||||||||||| Sbjct 29725 TCAAGCTGCTTGCCGGCAAAGATCAGGCGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCC 29666 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || |||||| | || | || || |||||| || | || || ||| Sbjct 29665 TGGATCTTGCTCTTGACGTTGTCGATTGTGTCCGAGGACTCGACTTCGAGCGTGATAGTC 29606 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||||| || || |||||||||||||| ||||| Sbjct 29605 TTTCCAGTAAGAGTCTTTACAAAGATTTGCAT 29574 Score = 113 bits (124), Expect = 3e-20 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| ||||||| |||||||||||||| ||||| ||||| || |||| | || Sbjct 30241 AGGACAAGGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTGAGCGTGCGGCCGTCC 30182 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| ||||| |||||||| || || ||||| | || | ||||||||||| Sbjct 30181 TCAAGCTGCTTGCCGGCAAAGATCAGGCGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCC 30122 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || |||||| | | || | || || |||||| || | || || ||| Sbjct 30121 TGGATCTTGCTCTTGACGTTTTCGATTGTGTCCGAGGACTCGACTTCGAGCGTGATAGTC 30062 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || || |||||||| || || | |||||| Sbjct 30061 TTGCCAGTAAGGGTCTTGACGAACACCTGCAT 30030 Score = 113 bits (124), Expect = 3e-20 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| ||||| | |||||||||||||| ||||| ||||| || | || | || Sbjct 30469 AGGACAAGGTGGAGCGTGCTCTCCTTCTGGATGTTGTAGTCACTCAGAGTACGGCCGTCC 30410 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 ||||| ||||| ||||| ||||| || || || ||||| | || | ||||||||||| Sbjct 30409 TCCAGCTGCTTGCCGGCAAAGATAAGACGCTGTTGGTCCGGGGGGATACCCTCCTTGTCC 30350 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || |||||| | | |||| || || ||| || || | || || ||| Sbjct 30349 TGGATCTTGCTCTTGACGTTTTCGATCGTGTCCGAGGACTCAACTTCGAGCGTGATAGTC 30290 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || || |||||||| ||||||| |||||| Sbjct 30289 TTGCCAGTAAGGGTCTTGACAAAGACCTGCAT 30258 Score = 107 bits (118), Expect = 1e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 34781 GTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCG 34840 |||||||||||||| ||||| ||||| || | || | || ||||| ||||| ||| Sbjct 29998 GTGCTCTCCTTCTGGATGTTGTAGTCACTCAGAGTACGACCGTCCTCCAGCTGCTTACCG 29939 Query 34841 GCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTG 34900 || ||||| || || || ||||| | || | ||||||||||| | || || ||| Sbjct 29938 GCAAAGATAAGACGCTGTTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTGCTCTTG 29879 Query 34901 ACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTC 34960 ||| | | |||| ||| | ||||| || | || || ||||| || ||||||||| Sbjct 29878 ACGTTTTCGATCGTGTCAGACGATTCGACTTCCAGAGTGATCGTCTTGCCAGTGAGGGTC 29819 Query 34961 TTTACAAAGATCTGCAT 34977 || ||||||| |||||| Sbjct 29818 TTGACAAAGACCTGCAT 29802 >seq75 Length=115788 Score = 109 bits (120), Expect = 4e-19 Identities = 145/199 (73%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 34781 GTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCG 34840 |||||||||||||| || |||||||| ||| |||| |||| || |||||||| || Sbjct 54578 GTGCTCTCCTTCTGGATATTATAGTCACTGAGGGTGCGGCCATCCTCTAGTTGCTTGCCT 54637 Query 34841 GCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTG 34900 || |||||||| || || || || | || | ||||||||||| | || || ||| Sbjct 54638 GCAAAGATCAGACGCTGTTGATCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGCTCTTG 54697 Query 34901 ACGGATG-CTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGT 34959 || |||| | || | || || |||||| || | || || ||||| || || || || Sbjct 54698 AC-GATGTCAATGGTATCGGAGGACTCGACCTCGAGAGTGATTGTCTTGCCGGTAAGAGT 54756 Query 34960 CTTTACAAAGATCTGCATG 34978 ||| ||||||| ||||||| Sbjct 54757 CTTGACAAAGACCTGCATG 54775 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325692498327044