Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20cuniculi_20[genbank_20GCA_5F001264635.1_202015-08-11] 76 sequences; 7,459,907 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq58 95.1 8e-15 seq39 82.4 5e-11 >seq58 Length=446738 Score = 95.1 bits (104), Expect = 8e-15 Identities = 145/204 (71%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 33547 TGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGT 33606 || ||||||||||| || || |||||||| ||| || ||||| |||| || | || Sbjct 376242 TGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTAAGAGTGCGACCGTCCTCGAGCTGC 376183 Query 33607 TTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTC 33666 || ||||| |||||||| ||||| || || | || | ||| || ||||| ||| || Sbjct 376182 TTGCCGGCGAAAATCAACCGCTGTTGGTCCGGAGGAATACCCTCCTTGTCCTGAATCTTA 376123 Query 33667 TGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGT 33725 || | || ||| | |||||| | || || || |||| |||||||| || || || Sbjct 376122 GACTTGACGAT-GTCGATCGTGTCGTTCGACTCGACCTCAAGAGTGATCGTCTTGCCCGT 376064 Query 33726 TAACGTTTTTACAAAGATCTGCAT 33749 | || || || ||||||||||| Sbjct 376063 GAGTGTCTTGACGAAGATCTGCAT 376040 >seq39 Length=522589 Score = 82.4 bits (90), Expect = 5e-11 Identities = 145/208 (70%), Gaps = 4/208 (2%) Strand=Plus/Minus Query 33547 TGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGT 33606 || ||||||||||| || || |||||||| ||| ||| ||||| |||| || | || Sbjct 29776 TGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTGAGCGTGCGGCCGTCCTCAAGCTGC 29717 Query 33607 TTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGT-CGGCAATTTT 33665 || |||||||| |||| ||||| || || | || | || || |||| | | | || Sbjct 29716 TTGCCGGCAAAGATCAGGCGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATCTTG 29657 Query 33666 CTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTG 33724 || || || | ||| | ||||| || || || || | |||||| || || || | Sbjct 29656 CTCTT--GACGTTGTCGATTGTGTCCGAGGACTCGACTTCGAGCGTGATAGTCTTTCCAG 29599 Query 33725 TTAACGTTTTTACAAAGATCTGCATAGT 33752 | | || ||||||||||| ||||| || Sbjct 29598 TAAGAGTCTTTACAAAGATTTGCATTGT 29571 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328703695537920