Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20cuniculi_20[genbank_20GCA_5F001264635.1_202015-08-11] 76 sequences; 7,459,907 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq40 187 2e-42 >seq40 Length=46956 Score = 187 bits (206), Expect = 2e-42 Identities = 1110/1742 (64%), Gaps = 62/1742 (4%) Strand=Plus/Plus Query 146701 ATGAAAGCGTTGCGGTCGGCCGCCATCTCAATCATG-CGTTTTGTCTTCATTTCCCAAGC 146759 ||||| || ||||||||| ||||| || || ||| | ||||| || || ||||| | Sbjct 29617 ATGAATGCACCGCGGTCGGCGGCCATGTCGATAATGACCTTTTGGCTG-ATCTCCCACAC 29675 Query 146760 GGTTTTGTACAGCCCCTTAACGCTATCTGGAATACCTTCAATGTTTTGAATAGAGCCCTT 146819 ||| ||||| ||| |||| | | || |||||| | ||||| || |||||||| | Sbjct 29676 GGTCTTGTAGAGCGCCTTGATCCGGTCGGGAATATCGGGGATGTTCTGGATAGAGCCACT 29735 Query 146820 GTGCGCAAAAATAGTGTTTCGTATT---TCGGGCGTGTAAAGGTTTAGTTTAATGAGGTC 146876 |||||| | | | | || || ||| | | ||| || | | || || Sbjct 29736 GTGCGCGATCAGACGCTCGCGCATGGTATCGTTCC---ACAGGCCCAGCTCGACAAGCTC 29792 Query 146877 ATCAATTAAATACTGATTGACCACTTGAAACTCGCCCGCCAGCACACGTCTGAGATACAC 146936 | | || | || ||||| || |||||||| || |||||||| | | || | Sbjct 29793 GCGGAGCAGCCACGGGTTCACCACCTGGAACTCGCCGGCGAGCACACGGCGCATGTAAAT 29852 Query 146937 ATTGCTAGTGAAAGGCTCAAAAGACTCATTATTGCCTAATATTTGGGCCGTGGTTGCGGT 146996 ||||| ||| | |||||||| |||| ||| ||| | || ||| ||| | ||||| Sbjct 29853 GTTGCTGGTGTATGGCTCAAAGCACTCGTTAAAGCCGAGAATCTGGCTCGTCGACGCGGT 29912 Query 146997 AGGCATGTACGCCACCAACAATGAATTTCGCAGACCGTAC-GCACGGATGTTGTCCTTCA 147055 ||||| || | || || || || ||||| |||| | || | || ||| |||| | Sbjct 29913 GGGCATCGGGGCGAGCAGCAGCGAGTTACGCAGGCCGTGCTGCGCA-ATCTTGGCCTTGA 29971 Query 147056 AAGTTTGCCAGTCCCACATCGACGAGGGCGTCACGTTCCACATGTCGTACTGGAGCACTC 147115 | ||||||||| | || ||| || |||||||||||||||||| || | | Sbjct 29972 GCGAGGCCCAGTCCCAGAGGTCCGTGGGAGTACGGTTCCACATGTCGTACTGCAGAATGC 30031 Query 147116 CTCGACTGGCGGGACTGCCAGCGAACGTAGTGTAGCTTCCGTCGCGCTGCGCCAATTCAC 147175 | | || || || ||||| || | || |||| | |||| ||| || | || | Sbjct 30032 CCTGGCTCGCAGGGCTGCCCTCGTATGTCTCGTAGGTGCCGTACTGCTCGGCAAGCTCGC 30091 Query 147176 AGCTTGC-CTCGAGCGCTCCATAGTATATGGTTTCGGCGATTTGTTTGTTTAGGACGGTC 147234 | | || ||||||||| | | ||| || || || ||| || ||| || | | Sbjct 30092 A-CGAGCGCTCGAGCGCAGCGTGGTAAATCGTCTCAAAGATCTGCACGTTCAGCTGGCGC 30150 Query 147235 GCTTCTTCGCTCTCGTAAGGCATA-CGCAGAAGCACAAAGGCATCGGCCAAACCCTGGAT 147293 || || ||| || |||| || | || | || || ||||| || | |||||||| Sbjct 30151 GCCTCGGGGCTGTCA-AAGGGGTAGCCCATGATCATGAACGCATCAGCGAGACCCTGGAC 30209 Query 147294 ACCGACGCCGATAGGTCGATG---CTTTTCGTTGCTGCGCTTCGCGCTCGCTATGGGATA 147350 ||||| ||||| || || || | | | | || |||| || |||| | ||| || Sbjct 30210 ACCGATACCGATCGGGCGGTGGCGCATGTTGGAGCGGCGCGCCGA-CTCG--ACGGGGTA 30266 Query 147351 GTGGTTGCGATCAATAATCTTGTTGAGGTTACGCACTACAACTTTAGTTATTGTTTTGAG 147410 || |||| ||| || || ||| ||||| ||| || || || | | | ||| Sbjct 30267 GTAGTTGATATCGATGATGCGGTTCAGGTTGCGCGTGACGACCTTGGCGACGTCGTGGAG 30326 Query 147411 TTTCTCGAAATCATAAGTCCCG-TCTTCGACACGTACGCATTGGTTCACGGCG--ATAGA 147467 || ||| | || ||| | || | | | | || ||| | ||| || || Sbjct 30327 ACGCTGGAAGTTGTACGTCTTGGTCGTAGTGCCCTCGACAAAGGTGGGCAGCGCAATCGA 30386 Query 147468 CGCCAGATTGCAGACGGCCGTCTCTTCGGCGTCGCTGTACTGCACGATTTCGGCGCACAG 147527 ||| || ||||| ||||| ||||| |||| |||||||| | || || | |||||| Sbjct 30387 CGCGAGGTTGCACACGGCGGTCTCGTCGGGCGAGCTGTACTCGATAATCTCTGTGCACAG 30446 Query 147528 GTT---GCTGCATTTTATGACTCCCAAATTTTGCTGATTGCTTTTCCGATT-GCACGCGT 147583 ||| ||||| | || || | || | || ||||| || | || ||| || | Sbjct 30447 GTTCGAGCTGCGGATGGTG---CCGAGGTTCTTTTGGTTGCTCTTGCTGTTCGCA-GCAT 30502 Query 147584 CTTTGAAGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTCAACGATAAACCTATG-C 147642 | ||| | || || | || ||| ||||||| || | || | ||| | || | Sbjct 30503 CCTTGTACAGAATAAAGGGGTTGCCCGTCTCGATCTGGGCCTCGAGGATCG-CGTACCAC 30561 Query 147643 AGGTCCTGCGCTCGCACC---CGCT-GCCGATAGCGGCCCTCGTTTTCGTACCGCTCGTA 147698 || | ||||| || |||| | || || |||||| |||||||||||||| Sbjct 30562 AGCTTTTGCGCCTTGACAGTGCGCTTGGCG----CGTCCCTCGCGCTCGTACCGCTCGTA 30617 Query 147699 CAACCGCTCAAACTCGTCGCCGTAGCAATCGGCAAGGCCGGGACACTGATGCGGACACAT 147758 | | ||| ||||| | ||||||||| || | || ||||| || || ||||| Sbjct 30618 GAGCTCCTCGAACTCCTTGCCGTAGCAGTCAGAGAGACCGGGGGCCTCGGCGGGGCACAT 30677 Query 147759 CAGCGACCACATGTCGTCCGCGTTAACGCGTCGCATAAACAGATCCGGCACCCACAGCGC 147818 |||||||| |||| | | || || ||| |||||||| || | ||| ||||| Sbjct 30678 GAGCGACCAGTCTTCGTTCTTCTCGACACGCTTCATGAACAGATCAGGGATCCAGAGCGC 30737 Query 147819 GTACATAAGATCGCGCGCTTTGCAATCCTCGGCGCCCATGTT---GCGTTTCAAATTAA- 147874 || | || || || || | ||||| ||| ||| ||| || || | Sbjct 30738 ATAGAACAGGTCACGGGCACGGACCTCCTCCTTGCCGTGGTTCTTGCG---CAGATCGAT 30794 Query 147875 GCACGCTATAGATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGCGCACCTTTACGCT 147934 | || | | | | ||| ||||||||||| || | |||||| || | ||||| |||| Sbjct 30795 GAACTCAA-ACACGTCAGCGTGCCAGGGCTCGAGGTAGACAGCAAAGGCACCGGGGCGCT 30853 Query 147935 TT---CCGCCCTGGTCGACATGGCGCACCATGTTGTTAAACACGCGCACCATGGGTTCCA 147991 | |||||||||||||| | ||| | ||||||| ||||||| | |||||| | | Sbjct 30854 TGTTGCCGCCCTGGTCGACGTAGCGGGCAGTGTTGTTGTACACGCGGAGCATGGGCACAA 30913 Query 147992 GGCCGCT-CGCAGTGCCGTTGGTGGAATTGATCTTGCTGCCGCGGGCTCGCACTTCGTGC 148050 |||| | | || |||||| ||| || | ||| ||| || | ||| Sbjct 30914 TGCCGTTGCTCAC-GCCGTTCGTGCCGGCAATGTACGAGCCAGTGGCACGGATGCAGTGG 30972 Query 148051 ACGTTAACGCCAATGCCGCC-GCCGTACTT--TGAT-ATGGCAGCGCAATCGCCCAATGT 148106 | ||| | |||||||| || ||||| ||| |||| ||||| | | | | ||| Sbjct 30973 ATGTTGAGACCAATGCCACCCGCCGT-CTTGCTGATCATGGCGCAGGTCTTG---AGTGT 31028 Query 148107 CGTGTAGATGCCGTCGATGCTGTCGTTTTTGACGCCAAGCAAAAAACACGAACACATTTG 148166 ||||||||| ||||| ||||| || | || | | || ||||| |||| || Sbjct 31029 GTCGTAGATGCCCTCGATCGAGTCGTCCTTCATGCACACGAGGAAGCACGACGACATCTG 31088 Query 148167 CGGAATCCGCGTTCCCGCCGAGAAAAGGGTGGGACTCGCGTGCGTAAACAATTTTTGACT 148226 ||| || | || || || ||| || ||||| ||| || ||||| || | Sbjct 31089 CGGGTTCGGGGTGCCTGCGTTGAAGAGAGTGGGCGACGCATGAGTAAAGGCCTTCTCCGA 31148 Query 148227 CATCATGCGATACGTCTCAATAGCGTCTTCGATGTCGTCGCCGTGAATGCCCAGCGCGAC 148286 ||| | ||||||||||| ||| | || ||||| |||||| ||||| | ||||| Sbjct 31149 CATGTAGTTGTACGTCTCAATCGCGGCCTCAATGTCCGAGCCGTGGATGCCGACGGCGAC 31208 Query 148287 GCGCATGAGCATGTGCTGTGGTCGTTCGGCAACTTGATTGTTGATCTTGAGAAGATATCC 148346 ||||||||||||||||| || || |||||||| | ||| || || ||||| Sbjct 31209 ACGCATGAGCATGTGCTGGGGGCGCTCGGCAACCTTGCCGTTAATGCGCAGCAGATAAGA 31268 Query 148347 ATTTTCGAGGGTTTTGTAACCAAAGTACTTGTAATCAAAATCTAGCTCGTAAGCGATGGC 148406 || || || ||| |||| || | ||||| | ||| || ||||||| |||||| Sbjct 31269 GCGCTCAAGAGTCTTGAAACCGAAAAAGTTGTAGTGAAAGTCGCGCTCGTAGATGATGGC 31328 Query 148407 CG 148408 || Sbjct 31329 CG 31330 Score = 143 bits (158), Expect = 3e-29 Identities = 335/504 (66%), Gaps = 15/504 (3%) Strand=Plus/Plus Query 46773 AAAAAGGCCCAGTGGGCCATGAAGTGGATCGAGAGCGAGACCGCCACGCTGGCC-----G 46827 || ||||| ||||||| || ||||||| | ||||||| ||| || | Sbjct 41962 AAGAAGGCGGAGTGGGCGCTGCGGTGGATCAAC-----GACCGCCGCGCGAGCTTCTCGG 42016 Query 46828 AGCGCATGGTGGCATTCGCGATAGTCGAAGGCGTGtttttttCGGGCAGTTTTGCCGCCA 46887 ||||| ||||||| |||||| || || ||| | || ||||| || ||||| | | Sbjct 42017 AGCGCCTGGTGGCGTTCGCGGCCGTGGAGGGCATCTTCTTTTCCGGATCGTTTGCGTCGA 42076 Query 46888 TTTTTTACATTAAAACCAAAGGCATAATGCCGGGCCTGACGTTCAGTAACGAGTTGATCT 46947 | |||| | || | ||| | ||||| || ||| ||||| |||||| |||||| Sbjct 42077 TCTTTTGGCTGAAGAAGCGTGGCCTGATGCCTGGTCTGTCGTTCTCGAACGAGCTGATCT 42136 Query 46948 CGCGCGACGAAGGACTACACACGGACTTTGCGTGTCT-CTATTACAAGACGCGCGTGAAT 47006 |||| ||||| ||||| ||||| |||||||| || || || || | | | |||| Sbjct 42137 CGCGGGACGAGGGACTGCACACTGACTTTGCATGCCTGCTGTTC----AGCCACCTGAAG 42192 Query 47007 GAGAAATTAAACTCGGACACGATCCTGAGCATGTTTAGGGAGGCGGTGAGCATCGAAAAG 47066 || || | ||||||| | || | | ||||| ||| || || || Sbjct 42193 AAGCGGGCGCACCCCAGCACGATCGAGGCGATCATCACCGAGGCCGTGGAGATTGAGCAG 42252 Query 47067 GAGTTTTTTACTGCGGCGCTGCCCGTCGCCTTGCTGGGCATGAACGCACAGTCTATGTGC 47126 || ||||| | | |||||||| || | || | ||||||||||| | | |||||| Sbjct 42253 GACTTTTTGTCGGACGCGCTGCCGGTGTCGCTGATCGGCATGAACGCGCGGCTGATGTGC 42312 Query 47127 GAATATATTGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGACAACCGAAATATTTT 47186 | || ||||||||||| || || || ||| ||||| |||||| | ||||| | | Sbjct 42313 CAGTACATTGAGTTTGTCGCAGACCGGCTGCTGGTGGCGCTCGGGAACCCGAAGCACTAC 42372 Query 47187 AATGCTCGTAATCCGTTTGAGTTTATGAACAACATTTCGCTCGAGGGCAAAACCAATTTT 47246 | || || || || || |||||| | ||||||||||| ||||||| | || ||| Sbjct 42373 CACGCAAAGAACCCATTCGACTTTATGGAGAACATTTCGCTGCAGGGCAAGTCGAACTTT 42432 Query 47247 TTCGAGAAACGAGTCGGAGAGTAT 47270 |||||| || || || || ||| Sbjct 42433 TTCGAGCGTCGGGTGGGCGACTAT 42456 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476610747219360