Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20cuniculi_20[genbank_20GCA_5F001264635.1_202015-08-11] 76 sequences; 7,459,907 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq39 113 4e-20 seq2 104 2e-17 seq58 93.3 4e-14 seq75 87.8 2e-12 >seq39 Length=522589 Score = 113 bits (124), Expect = 4e-20 Identities = 140/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 27057 TCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAA 27116 || || || || |||||||| |||| | || |||| || ||||| |||||||| | Sbjct 29992 TCCTTCTGGATGTTGTAGTCACTCAGAGTACGACCGTCCTCCAGCTGCTTACCGGCAAAG 29933 Query 27117 ATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTT 27176 || ||||||||||| ||||| || | |||||| || || ||||||| | || | | || Sbjct 29932 ATAAGACGCTGTTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTGCTCTTGACGTTT 29873 Query 27177 TCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACA 27236 || | ||||| | | ||| ||||| ||||| || | ||||| || || || || ||| Sbjct 29872 TCGATCGTGTCAGACGATTCGACTTCCAGAGTGATCGTCTTGCCAGTGAGGGTCTTGACA 29813 Query 27237 AAGATTTGCATA 27248 |||| |||||| Sbjct 29812 AAGACCTGCATA 29801 Score = 113 bits (124), Expect = 4e-20 Identities = 140/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 27057 TCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAA 27116 || || || || |||||||| |||| | || |||| || ||||| || ||||| | Sbjct 30448 TCCTTCTGGATGTTGTAGTCACTCAGAGTACGGCCGTCCTCCAGCTGCTTGCCGGCAAAG 30389 Query 27117 ATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTT 27176 || ||||||||||| ||||| || | |||||| || || ||||||| | || | | || Sbjct 30388 ATAAGACGCTGTTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTGCTCTTGACGTTT 30329 Query 27177 TCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACA 27236 || | ||||| | || |||||||| || || |||| ||||| || || || || ||| Sbjct 30328 TCGATCGTGTCCGAGGACTCAACTTCGAGCGTGATAGTCTTGCCAGTAAGGGTCTTGACA 30269 Query 27237 AAGATTTGCATA 27248 |||| |||||| Sbjct 30268 AAGACCTGCATA 30257 Score = 105 bits (116), Expect = 6e-18 Identities = 138/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 27057 TCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAA 27116 || || || || ||||||||||| | |||| |||| || ||||| || ||||| | Sbjct 29764 TCCTTCTGGATGTTGTAGTCGCTGAGCGTGCGGCCGTCCTCAAGCTGCTTGCCGGCAAAG 29705 Query 27117 ATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTT 27176 || || |||||||| ||||| || | ||||| || || ||||||| | || | | | Sbjct 29704 ATCAGGCGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATCTTGCTCTTGACGTTG 29645 Query 27177 TCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACA 27236 || | ||||| | || || ||||| || || |||| || || || ||||| || ||| Sbjct 29644 TCGATTGTGTCCGAGGACTCGACTTCGAGCGTGATAGTCTTTCCAGTAAGAGTCTTTACA 29585 Query 27237 AAGATTTGCAT 27247 ||||||||||| Sbjct 29584 AAGATTTGCAT 29574 Score = 95.1 bits (104), Expect = 1e-14 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 27057 TCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAA 27116 || || || || ||||||||||| | |||| |||| || ||||| || ||||| | Sbjct 30220 TCCTTCTGGATGTTGTAGTCGCTGAGCGTGCGGCCGTCCTCAAGCTGCTTGCCGGCAAAG 30161 Query 27117 ATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTT 27176 || || |||||||| ||||| || | ||||| || || ||||||| | || | | || Sbjct 30160 ATCAGGCGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATCTTGCTCTTGACGTTT 30101 Query 27177 TCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACA 27236 || | ||||| | || || ||||| || || |||| ||||| || || || || || Sbjct 30100 TCGATTGTGTCCGAGGACTCGACTTCGAGCGTGATAGTCTTGCCAGTAAGGGTCTTGACG 30041 Query 27237 AAGATTTGCATA 27248 || | |||||| Sbjct 30040 AACACCTGCATA 30029 >seq2 Length=94478 Score = 104 bits (114), Expect = 2e-17 Identities = 143/200 (72%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 27057 TCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAA 27116 || || || || ||||||||||| | | |||| | || |||||||| || ||||| | Sbjct 13114 TCCTTCTGGATGTTGTAGTCGCTAAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCAAAG 13173 Query 27117 ATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTT 27176 || || |||||||| ||||| || | |||||| || || |||||| || | | | Sbjct 13174 ATCAGGCGCTGTTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTTCCCTTGACGTTC 13233 Query 27177 TCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACA 27236 || | |||||| | | || || || || || |||| || ||||| || || || || Sbjct 13234 TCGATAGTGTCGGAAGACTCCACCTCAAGGGTGATAGTCTTCCCCGTGAGGGTCTTGACG 13293 Query 27237 AAGATTTGCATAGCTGCTAA 27256 |||| |||||| |||||||| Sbjct 13294 AAGACTTGCATGGCTGCTAA 13313 >seq58 Length=446738 Score = 93.3 bits (102), Expect = 4e-14 Identities = 137/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 27057 TCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAA 27116 || || || || ||||||||||| | |||| |||| |||||||| || |||||| || Sbjct 376230 TCCTTCTGGATGTTGTAGTCGCTAAGAGTGCGACCGTCCTCGAGCTGCTTGCCGGCGAAA 376171 Query 27117 ATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTT 27176 || | |||||||| ||||| || | |||||| || || ||||| || | | | Sbjct 376170 ATCAACCGCTGTTGGTCCGGAGGAATACCCTCCTTGTCCTGAATCTTAGACTTGACGATG 376111 Query 27177 TCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACA 27236 || | ||||| | | || || || ||||| || | |||||||| || || || || Sbjct 376110 TCGATCGTGTCGTTCGACTCGACCTCAAGAGTGATCGTCTTGCCCGTGAGTGTCTTGACG 376051 Query 27237 AAGATTTGCATAGC 27250 ||||| ||||| || Sbjct 376050 AAGATCTGCATGGC 376037 >seq75 Length=115788 Score = 87.8 bits (96), Expect = 2e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 27057 TCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAA 27116 || || || ||||| ||||| || | | |||| | || || || || || || || | Sbjct 54584 TCCTTCTGGATATTATAGTCACTGAGGGTGCGGCCATCCTCTAGTTGCTTGCCTGCAAAG 54643 Query 27117 ATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTT 27176 || ||||||||||||||||| || | ||||| || || ||||||| | || | | | Sbjct 54644 ATCAGACGCTGTTGATCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGCTCTTGACGATG 54703 Query 27177 TCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACA 27236 || | || || | || || || || ||||| || | ||||| || ||||| || ||| Sbjct 54704 TCAATGGTATCGGAGGACTCGACCTCGAGAGTGATTGTCTTGCCGGTAAGAGTCTTGACA 54763 Query 27237 AAGATTTGCAT 27247 |||| ||||| Sbjct 54764 AAGACCTGCAT 54774 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424934006404512