Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20cuniculi_20[genbank_20GCA_5F001264635.1_202015-08-11] 76 sequences; 7,459,907 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq40 217 2e-51 >seq40 Length=46956 Score = 217 bits (240), Expect = 2e-51 Identities = 916/1422 (64%), Gaps = 32/1422 (2%) Strand=Plus/Plus Query 118155 AACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCA 118214 ||||| || ||||| || | || || || ||| | |||||||||||||||||||| Sbjct 29821 AACTCGCCGGCGAGCACACGGCGCATGTAAATGTTGCTGGTGTATGGCTCAAAGCACTCG 29880 Query 118215 TTGTTACCCAAGATTTGGGCT-GTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTT 118273 || | || ||| | |||| || || || |||||||| || || | || || ||| Sbjct 29881 TTAA-AGCCGAGAATCTGGCTCGTCGACGCGGTGGGCATCGGGGCGAGCAGCAGCGAGTT 29939 Query 118274 ACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGAGCGTCCCAGTCGTAGTTGAGCTTTGT 118333 ||| || || | | | ||| ||||||| | | ||||||| || | | | | Sbjct 29940 ACGCAGGCCGTGCTGCGCAATCTTGGCCTTGAGCGAGGCCCAGTCCCAGAGGTCCGTGGG 29999 Query 118334 CTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGT 118393 | | |||||| || |||| || || || ||| ||| || ||||| |||| Sbjct 30000 AGTACGGTTCCACATGTCGTACTGCAGAATGCCCTGGCTCGCAGGGCTGCCCTCGTATGT 30059 Query 118394 CTCATATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGC-CTCGAGGGCTGCGTGATACA 118452 ||| || | ||| | ||| || | ||| | | || |||||| || ||||| || | Sbjct 30060 CTCGTAGGTGCCGTACTGCTCGGCAAGCTCGCA-CGAGCGCTCGAGCGCAGCGTGGTAAA 30118 Query 118453 TTGTTTCAAAAATGCGAGCATTCAT-TGCCTTGGCCTCGTCGGAATCAAACGCG-AGTCG 118510 | || ||||| || | | |||| || | | ||||| | ||||| | | || | Sbjct 30119 TCGTCTCAAAGATCTGCACGTTCAGCTGGCGCG-CCTCGGGGCTGTCAAAGGGGTAGCC- 30176 Query 118511 GCACAAA-ATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCA 118569 || | || || |||| |||||||| |||||||||| || || ||||| || | || Sbjct 30177 -CATGATCATGAACGCATCAGCGAGACCCTGGACACCGATACCGATCGGGCGGTGGCGCA 30235 Query 118570 TATTAGACTTCCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGAT 118629 | || || || || | ||| ||||| || | || ||||||| | | || || | Sbjct 30236 TGTTGGAGCGGCGCGCCGACTCGACGGGGTAGTAGTTGATATCGATGATGCGGTTCAGGT 30295 Query 118630 TTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTC-TCT 118688 | ||||| ||||| | || || || || | | | | | | ||| | Sbjct 30296 TGCGCGTGACGACCTTGGCGACGTCGTGGAGACGCTGGAAGTTGTACGTCTTGGTCGTAG 30355 Query 118689 T--CATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCT 118746 | | | |||| | | || || || || ||||| || || ||||| | |||||| || Sbjct 30356 TGCCCTCGACAAAGGTGGGCAGCGCAATCGACGCGAGGTTGCACACGGCGGTCTCGTCGG 30415 Query 118747 TATCAGTGTACTCTATAATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCT 118806 ||||||| ||||| || ||||||| ||| || || |||||||| | ||||| Sbjct 30416 GCGAGCTGTACTCGATAATCTCTGTGCACAGGTTCGAGCTGCGGATGGTGCCGAGGTTCT 30475 Query 118807 TTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCG 118866 |||| || ||| |||| ||||||||||| || || | || | |||||||| Sbjct 30476 TTTGGTTGCTCTTGCTGTTCGCAGCATCCTTGTACAGAATAAAGGGGTTGCCCGTCTCGA 30535 Query 118867 TTTGGGACTTGAGAATAGCCTTCCAGA-CATCGGCAGCTGGCACAGTGGCGTTGGCTCGC 118925 | |||| || ||| || || | ||| | | | || || | |||||| ||||| || Sbjct 30536 TCTGGGCCTCGAGGATCGCGTACCACAGCTTTTGCGCCTTG-ACAGTGCGCTTGGCGCGT 30594 Query 118926 CCCTCTTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGC 118985 ||||| ||||||| |||||| | || ||||| | || | || ||||| Sbjct 30595 CCCTCGCGCTCGTACCGCTCGTAGAGCTCCTCGAACTCCTTGCCGTAGCAGTCAGAGAGA 30654 Query 118986 CCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATG 119045 || || |||| | ||||| | ||| ||||| | | || ||| || ||||||||| Sbjct 30655 CCGGGGGCCTCGGCGGGGCACATGAGCGACCAGTCTTCGTTCTTCTCGACACGCTTCATG 30714 Query 119046 AAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCC 119105 || || || |||||||||||||| |||| || || || || | || || | || Sbjct 30715 AACAGATCAGGGATCCAGAGCGCATAGAACAGGTCACGGGCACGGACCTCCTCCTTGCCG 30774 Query 119106 TGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACC 119165 || || |||| || | || || | | || |||||||| || || ||||| || Sbjct 30775 TGGTTCTTGCGCAGATCGATGAACTCAAACACGTCAGCGTGCCAGGGCTCGAGGTAGACA 30834 Query 119166 GCGATTG-AC-----CCCTTACGACGACCAGCCTGGTTTACATACCTCGCAGTGGCGTTA 119219 || | | || | ||| | | || |||||| || || | |||||| ||| Sbjct 30835 GCAAAGGCACCGGGGCGCTT--GTTG-CCGCCCTGGTCGACGTAGCGGGCAGTGTTGTTG 30891 Query 119220 AATACACGAAGCATTGGAATGATACCATCGGATTGGCCATTTGTCCCCCGAA--TACGAG 119277 | || || ||||| || | || || | | ||| || || || || |||||| Sbjct 30892 TACACGCGGAGCATGGGCACAATGCCGTTGCTCACGCCGTTCGTGCCGGCAATGTACGAG 30951 Query 119278 ACTTATTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTT 119337 | | |||| | || |||||||| | |||||| || || ||| ||| ||| Sbjct 30952 CC--AGTGGCACGGATGCAGTGGATGTTGAGACCAATGCCACCCGCCGTCTTGCTGATCA 31009 Query 119338 GCGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGA 119397 ||||| | |||| || ||||||| || ||||||||||| |||| | | || Sbjct 31010 TGGCGCAGGTCTTGAGTGTGTCGTAGATGCCCTCGATCGAGTCGTCCTTCATGCACACGA 31069 Query 119398 GGAAGCAGCTCGACATTTGAGGCCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGT 119457 ||||||| |||||| || || | || || || |||||||||||||| || | ||| | Sbjct 31070 GGAAGCACGACGACATCTGCGGGTTCGGGGTGCCTGCGTTGAAGAGAGTGGGCGACGCAT 31129 Query 119458 GGATGAA--CATACCTTGGGACATCTTGTCGTAGGTCTCCAAGACGGCGGGAATGTCTTC 119515 | | || | | | | ||||| | || ||| ||||| | |||| |||||| Sbjct 31130 GAGTAAAGGCCTTC--TCCGACATGTAGTTGTACGTCTCAATCGCGGCCTCAATGTCCGA 31187 Query 119516 CCCGTGAATACCGATCGAGACCCGCATAAACATGTATTGGGG 119557 ||||| || |||| | ||| ||||| | ||||| ||||| Sbjct 31188 GCCGTGGATGCCGACGGCGACACGCATGAGCATGTGCTGGGG 31229 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618434612486560