Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20cuniculi_20[genbank_20GCA_5F001264635.1_202015-08-11] 76 sequences; 7,459,907 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq40 102 1e-16 seq20 82.4 9e-11 >seq40 Length=46956 Score = 102 bits (112), Expect = 1e-16 Identities = 116/153 (76%), Gaps = 2/153 (1%) Strand=Plus/Plus Query 94804 GAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCG-C 94862 ||||| || | || || ||| || ||||| |||||||| || || || || |||| | Sbjct 42016 GAGCGCCTGGTGGCGTTCGCGGCCGTGGAGGGCATCTTCTTTTCCGGATCGTT-TGCGTC 42074 Query 94863 TATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTAT 94922 || | |||||| |||||||| || || ||||| ||||| | ||||| |||||||| || Sbjct 42075 GATCTTTTGGCTGAAGAAGCGTGGCCTGATGCCTGGTCTGTCGTTCTCGAACGAGCTGAT 42134 Query 94923 CTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 94955 ||| || ||||||||||| ||| || ||||| Sbjct 42135 CTCGCGGGACGAGGGACTGCACACTGACTTTGC 42167 >seq20 Length=1667054 Score = 82.4 bits (90), Expect = 9e-11 Identities = 211/316 (67%), Gaps = 4/316 (1%) Strand=Plus/Minus Query 9704 GCATCAATCTCATCAATGAAGACGATGCATGGTTG-ATTTTCGCGAGCGACTTCAAAGAG 9762 || ||||||||||| ||||| | ||||| || || ||| | || |||| | Sbjct 931139 GCGTCAATCTCATCGATGAAAATGATGCTCGGCGCCATCTTCTTG-GCAGTAGCAAACAT 931081 Query 9763 ATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGA-AC 9821 || || |||||| | ||| ||||||||||||||||| || || | | | || || Sbjct 931080 GTCACGCACACGCGAAGGGCCGACACCAACAAACATCTCGACGAACTCGGAACCAGACAC 931021 Query 9822 ATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCG 9881 | || | |||||| ||| || || || ||| | || ||| | |||||||||||| | Sbjct 931020 ACTG-AGGAAGGGCACACCAGCCTCGCCAGCAGTAGCCTTGGCAACAAGAGTCTTACCGG 930962 Query 9882 TACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCCACTTCCAAAGTATC 9941 |||| || ||| |||| ||| || || ||||||||||| || | ||||| Sbjct 930961 TACCCGGAGGACCGCTCAGGATGGCGCCACGGGGAATCTTGGCACCGAGACGCTCGTATC 930902 Query 9942 TCTCAGGTTGCTTAAGAAAATCCACAATTTCTTCCAATTCATCTTTGGCGGCGTCAATCC 10001 ||| || ||||| || || |||| || | || || ||||| ||| || | Sbjct 930901 GCTCGGGATGCTTGAGGAAGCTGACAAACTCCATAATCTCCTCCTTGGCTTCGTTCATGC 930842 Query 10002 CCTCAACATCGGTAAA 10017 | ||||||||| ||| Sbjct 930841 CAGCAACATCGGCAAA 930826 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583260245902240