Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20cuniculi_20[genbank_20GCA_5F001264635.1_202015-08-11] 76 sequences; 7,459,907 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq56 212 2e-49 seq39 116 1e-20 >seq56 Length=375030 Score = 212 bits (234), Expect = 2e-49 Identities = 493/739 (67%), Gaps = 16/739 (2%) Strand=Plus/Minus Query 349199 GCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGT 349258 ||| | || || || || |||||||| || |||||||| || || ||||| ||||| ||| Sbjct 331252 GCTGTTGGTATTGACTTGGGTACTACCTACTCTTGTGTGGCCGTCTGGCAGAATGACCGT 331193 Query 349259 GTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACC 349318 || || | ||||| || || || |||||| | || || || || |||||||| || ||| Sbjct 331192 GTCGAGGTCATTGCTAACGACCAGGGTAACCGTACGACTCCCTCGTACGTTGCCTTCACC 331133 Query 349319 GAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAAT 349378 || ||||||||| | || ||||| | || || || || | ||| || || | || Sbjct 331132 GACACTGAGCGTCTCATCGGTGACGCCGCCAAGAACCAGGTTGCCATGAACCCCCACAAC 331073 Query 349379 ACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGACAA--ATCTACACAAT 349436 || || || || |||||||| || ||||| | | | | ||| | | || | Sbjct 331072 ACTGTCTTCGACGCTAAGCGTCTCATTGGCCGCAAGTACACCGACTCTGAGGTCCAGAGC 331013 Query 349437 CTGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGAT----AAACCAATT 349492 || | || || | || || | || ||| |||| ||| || || Sbjct 331012 --GACATGAAGCACTGGCCCTTCAAGGTCGTT------GACG-TGAACGGCAAGCCCGAC 330962 Query 349493 ATTGAGGTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATG 349552 || |||| || || || ||||| | || || ||||| || || || || ||| Sbjct 330961 ATCAAGGTCGAGTACAAGGGTGAGGAGAAGGTCTTCACCCCCGAGGAGATCTCGTCGATG 330902 Query 349553 GTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCT 349612 || | | || |||||||| | ||| || || || | |||| || || | || || Sbjct 330901 GTCCTCCTCAAGATGAAGGAGACTGCCGAGGCTTACCTCGGTGGCACCGTCAAGGACGCC 330842 Query 349613 GTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGC 349672 || |||| || || ||||| || || || | |||||| || || || ||||| || Sbjct 330841 GTCGTTACCGTCCCCGCCTACTTCAACGACTCGCAGCGTCAGGCCACCAAGGATGCCGGT 330782 Query 349673 AGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCA 349732 |||||| || | |||||| | | || || || || || || || || || ||||| Sbjct 330781 GTCATTGCTGGCCTCAATGTTATGCGCATCATCAACGAGCCTACCGCCGCTGCCATTGCG 330722 Query 349733 TATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGT 349792 || || || || || | | || || || || || | || || || || | |||||| Sbjct 330721 TACGGTCTCGACAAGAAGGACGAGCAGGAGAAGAACGTGCTCATCTTCGACCTTGGTGGT 330662 Query 349793 GGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACT 349852 ||||| || ||||| || || || || |||| ||||| || || || || || || || Sbjct 330661 GGTACCTTCGATGTGTCGCTCCTCACCATTGAGGAGGGTATCTTCGAGGTCAAGGCCACC 330602 Query 349853 GCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTT 349912 |||||||| || || |||||||| || || ||||| || |||||||| || |||||| Sbjct 330601 GCTGGTGACACCCACCTTGGTGGTGAGGACTTTGACAACCGTCTCGTGAACCACTTTGTT 330542 Query 349913 AAAGAATTTAAGCGTCAAG 349931 | || || ||||| |||| Sbjct 330541 CAGGAGTTCAAGCG-CAAG 330524 >seq39 Length=522589 Score = 116 bits (128), Expect = 1e-20 Identities = 167/233 (72%), Gaps = 2/233 (1%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | |||||||| |||||||| ||| || || || || || || Sbjct 29804 CATACCACCACGAAGGCGGAGAACAAGGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTC 29745 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 | || || || || ||||| || || || |||||||| || || || || || || Sbjct 29744 GCTGAGCGTGCGGCCGTCCTCAAGCTGCTTGCCGGCAAAGATCAGGCGCTGTTGGTCCGG 29685 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCT-TTTACATTATCAATCGAATCAGATGGTT 140685 |||||| || || || ||||| || || ||| || || || || || | || || | | Sbjct 29684 AGGAATGCCCTCCTTGTCCTGGATCTT-GCTCTTGACGTTGTCGATTGTGTCCGAGGACT 29626 Query 140686 CAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCATT 140738 | ||||| || || | |||||||| || || || |||||||| || |||||| Sbjct 29625 CGACTTCGAGCGTGATAGTCTTTCCAGTAAGAGTCTTTACAAAGATTTGCATT 29573 Score = 96.9 bits (106), Expect = 1e-14 Identities = 162/232 (70%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || ||||| |||||||| ||| || || || || || || Sbjct 30260 CATACCACCACGCAGACGAAGGACAAGGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTC 30201 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 | || || || || ||||| || || || |||||||| || || || || || || Sbjct 30200 GCTGAGCGTGCGGCCGTCCTCAAGCTGCTTGCCGGCAAAGATCAGGCGCTGTTGGTCCGG 30141 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCT-TTTACATTATCAATCGAATCAGATGGTT 140685 |||||| || || || ||||| || || ||| || || || || || | || || | | Sbjct 30140 AGGAATGCCCTCCTTGTCCTGGATCTT-GCTCTTGACGTTTTCGATTGTGTCCGAGGACT 30082 Query 140686 CAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 | ||||| || || | ||||| || || || || || || || | |||||| Sbjct 30081 CGACTTCGAGCGTGATAGTCTTGCCAGTAAGGGTCTTGACGAACACCTGCAT 30030 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515252924521028