Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20cuniculi_20[genbank_20GCA_5F001264635.1_202015-08-11] 76 sequences; 7,459,907 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq30 105 6e-18 >seq30 Length=147637 Score = 105 bits (116), Expect = 6e-18 Identities = 243/364 (67%), Gaps = 4/364 (1%) Strand=Plus/Plus Query 34256 GGCGTGGTCGAGGAGCTGCTGTGGTTCGTGAGGGGGGCCACGAACACCAAGGAGCTCTCG 34315 || || | ||||||||| ||||||||| | | |||| |||| || | | ||| | Sbjct 99864 GGAGTCGCCGAGGAGCTTCTGTGGTTCATCAAGGGGTCCACTGACTCTAGACTGCTTGCT 99923 Query 34316 TCCCGGGGGGTGAAGATCTGGGACGCTCACGGGTCTCGAGACTTTCTGGACAAGCGGGGG 34375 || || ||| | |||||||||| |||| || || |||||||| ||||| || Sbjct 99924 GAGCGCGGTGTGCACATCTGGGACGGCAACGGCTCAAAGGAGTTTCTGGAGAAGCGCGGT 99983 Query 34376 TTCC--CATCTCGGGAGGAGGGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACT 34433 || || | | | ||||| || | || ||||| || || ||||||||| | |||| Sbjct 99984 CTCGGGCACCGCCGC--GAGGGAGATCTCGGTCCGGTGTATGGCTTCCAGTGGCGGCACT 100041 Query 34434 TTGGGGCGGAGTATCGGGGGAGCGAAGCGGACTATTCGGGACAGGGAGCGGACCAGCTGC 34493 |||| || |||| | || || | |||||| | |||||||||| |||||||| Sbjct 100042 TTGGCGCCAAGTACCAGGACGCTGATGTAGACTATGCCGGACAGGGAGTCGACCAGCTCG 100101 Query 34494 AGTACGTGATCGACACCTTGAAGCGGAACCCTGATGACAGAAGGATCGTGATGTGCGCGT 34553 | |||||||| || | ||| || || ||||| | | ||| | |||| |||| Sbjct 100102 CCCAGGTGATCGAGACGATCAAGAACAATCCAAATGACCGCCGCATCCTCATGTCGGCGT 100161 Query 34554 GGAACCCGAAGGATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCT 34613 ||||||| || | ||| ||||| || || || ||||| | ||||| |||| Sbjct 100162 GGAACCCAGCAGACATGGATCTTATGGCTCTGCCGCCCTGCCATGTGATGTGCCAGTTCT 100221 Query 34614 ACGT 34617 | || Sbjct 100222 ATGT 100225 Score = 105 bits (116), Expect = 6e-18 Identities = 243/364 (67%), Gaps = 4/364 (1%) Strand=Plus/Minus Query 6728 ACGTAGAATTGGCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGGG 6787 || ||||| ||||| | ||||| || || || ||||| ||| | || ||| Sbjct 100225 ACATAGAACTGGCACATCACATGGCAGGGCGGCAGAGCCATAAGATCCATGTCTGCTGGG 100166 Query 6788 TTCCACGCGCACATCACGATCCTTCTGTCATCAGGGTTCCGCTTCAAGGTGTCGATCACG 6847 |||||||| |||| | ||| | | ||||| || || ||| | || |||||||| Sbjct 100165 TTCCACGCCGACATGAGGATGCGGCGGTCATTTGGATTGTTCTTGATCGTCTCGATCACC 100106 Query 6848 TACTGCAGCTGGTCCGCTCCCTGTCCCGAATAGTCCGCTTCGCTCCCCCGATACTCCGCC 6907 | |||||||| |||||||||| | |||||| | || || | |||| || Sbjct 100105 TGGGCGAGCTGGTCGACTCCCTGTCCGGCATAGTCTACATCAGCGTCCTGGTACTTGGCG 100046 Query 6908 CCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCCCGAGATG-- 6965 |||||||| | ||||||||| || || ||||| || | || ||||| | | | || Sbjct 100045 CCAAAGTGCCGCCACTGGAAGCCATACACCGGACCGAGATCTCCCTC--GCGGCGGTGCC 99988 Query 6966 GGAACCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTCACCCCCC 7025 || || ||||| |||||||| || || |||| |||||||||| | ||| || | Sbjct 99987 CGAGACCGCGCTTCTCCAGAAACTCCTTTGAGCCGTTGCCGTCCCAGATGTGCACACCGC 99928 Query 7026 GGGACGAGAGCTCCTTGGTGTTCGTGGCCCCCCTCACGAACCACAGCAGCTCCTCGACCA 7085 | | ||| | | || |||| |||| | | ||||||||| ||||||||| | | Sbjct 99927 GCTCAGCAAGCAGTCTAGAGTCAGTGGACCCCTTGATGAACCACAGAAGCTCCTCGGCGA 99868 Query 7086 CGCC 7089 | || Sbjct 99867 CTCC 99864 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448261974150720