Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20cuniculi_20[genbank_20GCA_5F001264635.1_202015-08-11] 76 sequences; 7,459,907 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq39 181 2e-40 seq2 170 4e-37 seq75 152 1e-31 seq58 149 1e-30 seq40 105 2e-17 >seq39 Length=522589 Score = 181 bits (200), Expect = 2e-40 Identities = 174/223 (78%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||| | || ||||||||||||||| ||| || |||||||| || || || || Sbjct 29795 ACGAAGGCGGAGAACAAGGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTGAGCGT 29736 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | || || || ||||||||||| || ||||| ||||| |||||||| ||||||| || Sbjct 29735 GCGGCCGTCCTCAAGCTGCTTGCCGGCAAAGATCAGGCGCTGTTGGTCCGGAGGAATGCC 29676 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 ||||||||||||||||| || ||||| ||||| ||||| ||| || || ||||| Sbjct 29675 CTCCTTGTCCTGGATCTTGCTCTTGACGTTGTCGATTGTGTCCGAGGACTCGACTTCGAG 29616 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115 ||||| |||||||| || |||||||||||||| | |||||| Sbjct 29615 CGTGATAGTCTTTCCAGTAAGAGTCTTTACAAAGATTTGCATT 29573 Score = 179 bits (198), Expect = 9e-40 Identities = 167/212 (79%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 |||||||||||||||||| ||| || |||||||| || || || || | || || Sbjct 30241 AGGACAAGGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTGAGCGTGCGGCCGTCC 30182 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| || ||||| ||||| |||||||| ||||||| || ||||||||| Sbjct 30181 TCAAGCTGCTTGCCGGCAAAGATCAGGCGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCC 30122 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || ||||||||||| ||||| ||| || || ||||| ||||| ||| Sbjct 30121 TGGATCTTGCTCTTGACGTTTTCGATTGTGTCCGAGGACTCGACTTCGAGCGTGATAGTC 30062 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || || ||||| || ||||||||||| Sbjct 30061 TTGCCAGTAAGGGTCTTGACGAACACCTGCAT 30030 Score = 170 bits (188), Expect = 4e-37 Identities = 165/212 (78%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||||||||| || ||| ||| || |||||||| || || || || | || || Sbjct 30469 AGGACAAGGTGGAGCGTGCTCTCCTTCTGGATGTTGTAGTCACTCAGAGTACGGCCGTCC 30410 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||||||||||||| || |||||||| || |||||||| || || | || ||||||||| Sbjct 30409 TCCAGCTGCTTGCCGGCAAAGATAAGACGCTGTTGGTCCGGGGGGATACCCTCCTTGTCC 30350 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || ||||||||||| ||||| ||| ||||| ||||| ||||| ||| Sbjct 30349 TGGATCTTGCTCTTGACGTTTTCGATCGTGTCCGAGGACTCAACTTCGAGCGTGATAGTC 30290 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || || ||||| ||||| |||||||| Sbjct 30289 TTGCCAGTAAGGGTCTTGACAAAGACCTGCAT 30258 Score = 161 bits (178), Expect = 2e-34 Identities = 163/212 (77%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || || || || ||| ||| || |||||||| || || || || | || || Sbjct 30013 AGCACGAGATGGAGCGTGCTCTCCTTCTGGATGTTGTAGTCACTCAGAGTACGACCGTCC 29954 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 ||||||||||| || || |||||||| || |||||||| || || | || ||||||||| Sbjct 29953 TCCAGCTGCTTACCGGCAAAGATAAGACGCTGTTGGTCCGGGGGGATACCCTCCTTGTCC 29894 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || ||||||||||| |||||||| ||| || || |||||||||||| Sbjct 29893 TGGATCTTGCTCTTGACGTTTTCGATCGTGTCAGACGATTCGACTTCCAGAGTGATCGTC 29834 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || ||||| ||||| ||||| |||||||| Sbjct 29833 TTGCCAGTGAGGGTCTTGACAAAGACCTGCAT 29802 >seq2 Length=94478 Score = 170 bits (188), Expect = 4e-37 Identities = 165/212 (78%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || |||||||| |||||| ||| || |||||||| || || |||||| | ||||| Sbjct 13093 AGCACAAGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTAAGGGTGCGGCCATCC 13152 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| || ||||| ||||| |||||||| || || | || ||||||||| Sbjct 13153 TCGAGCTGCTTGCCGGCAAAGATCAGGCGCTGTTGGTCCGGGGGGATACCCTCCTTGTCC 13212 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 ||||||||| || ||||| ||||| ||||| || || ||||| || ||||| ||| Sbjct 13213 TGGATCTTTCCCTTGACGTTCTCGATAGTGTCGGAAGACTCCACCTCAAGGGTGATAGTC 13272 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || |||||||| ||||| || || || ||||| Sbjct 13273 TTCCCCGTGAGGGTCTTGACGAAGACTTGCAT 13304 >seq75 Length=115788 Score = 152 bits (168), Expect = 1e-31 Identities = 161/212 (76%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || || || || ||| ||| || ||||| ||||| || ||||| | ||||| Sbjct 54563 AGCACTAGATGGAGCGTGCTCTCCTTCTGGATATTATAGTCACTGAGGGTGCGGCCATCC 54622 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || || ||||||||||| ||||| || || ||||| || || |||| || ||||||||| Sbjct 54623 TCTAGTTGCTTGCCTGCAAAGATCAGACGCTGTTGATCCGGGGGAATGCCCTCCTTGTCC 54682 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || ||| | || ||||| || ||| || |||||||||||||| ||| Sbjct 54683 TGGATCTTGCTCTTGACGATGTCAATGGTATCGGAGGACTCGACCTCGAGAGTGATTGTC 54742 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || |||||||| ||||| |||||||| Sbjct 54743 TTGCCGGTAAGAGTCTTGACAAAGACCTGCAT 54774 >seq58 Length=446738 Score = 149 bits (164), Expect = 1e-30 Identities = 160/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| ||||| |||||| ||| || |||||||| || || ||| || | || || Sbjct 376251 AGGACGAGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTAAGAGTGCGACCGTCC 376192 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| ||||| || | || |||||||| ||||||| || ||||||||| Sbjct 376191 TCGAGCTGCTTGCCGGCGAAAATCAACCGCTGTTGGTCCGGAGGAATACCCTCCTTGTCC 376132 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || ||||| || ||| | ||||| ||||| || ||||| |||||||||||| Sbjct 376131 TGAATCTTAGACTTGACGATGTCGATCGTGTCGTTCGACTCGACCTCAAGAGTGATCGTC 376072 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || |||||||| ||||| || || | |||||| Sbjct 376071 TTGCCCGTGAGTGTCTTGACGAAGATCTGCAT 376040 >seq40 Length=46956 Score = 105 bits (116), Expect = 2e-17 Identities = 187/273 (68%), Gaps = 0/273 (0%) Strand=Plus/Plus Query 178093 GTTCTTTTGGTTGCTCTTTCTGCAAATGGCATCTTTGTACGCAATGAAGGGCATTCCCAC 178152 |||||||||||||||||| ||| ||||| |||||| ||| ||||| | ||| Sbjct 30471 GTTCTTTTGGTTGCTCTTGCTGTTCGCAGCATCCTTGTACAGAATAAAGGGGTTGCCCGT 30530 Query 178153 CTCAGCTTGAGCCACGAGAATGTGATGCCAAAGCTCCTGGGCTCGGACAGTCTTTTTGGC 178212 ||| || ||| |||| || | ||| |||| || || |||||| ||||| Sbjct 30531 CTCGATCTGGGCCTCGAGGATCGCGTACCACAGCTTTTGCGCCTTGACAGTGCGCTTGGC 30590 Query 178213 TTTTCCTTCATTCTCGTACTTTTTGTAGAGCTCCTCGAATTCCGGTCCATAGACATCATC 178272 ||| || ||||||| | ||||||||||||||| ||| || ||| ||| Sbjct 30591 GCGTCCCTCGCGCTCGTACCGCTCGTAGAGCTCCTCGAACTCCTTGCCGTAGCAGTCAGA 30650 Query 178273 GAGACCGGGAGCCTCATTGGGGCAGAAGAGACTCCACTGACCGTCTTCCTTCACTCGTTT 178332 ||||||||| ||||| |||||| | ||| ||| | ||| | || || || || Sbjct 30651 GAGACCGGGGGCCTCGGCGGGGCACATGAGCGACCAGTCTTCGTTCTTCTCGACACGCTT 30710 Query 178333 CATGAAGAGGTCAGAGGTCCAGATGGCATAGAA 178365 |||||| || |||| | |||||| |||||||| Sbjct 30711 CATGAACAGATCAGGGATCCAGAGCGCATAGAA 30743 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159150871275740