Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20cuniculi_20[genbank_20GCA_5F001264635.1_202015-08-11] 76 sequences; 7,459,907 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq2 120 7e-22 seq58 102 2e-16 seq39 98.7 2e-15 >seq2 Length=94478 Score = 120 bits (132), Expect = 7e-22 Identities = 156/213 (73%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAA-AGTTCTCCCATC 151951 || ||||| || ||||| ||| || ||||||||||| || ||||| || | ||||| Sbjct 13093 AGCACAAGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTC-GCTAAGGGTGCGGCCATC 13151 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 || || || ||||| ||||| || | ||| ||||||| | ||| || ||||| || Sbjct 13152 CTCGAGCTGCTTGCCGGCAAAGATCAGGCGCTGTTGGTCCGGGGGGATACCCTCCTTGTC 13211 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071 || || ||| ||||| |||| | |||| ||| ||| || ||||| || ||||| Sbjct 13212 CTGGATCTTTCCCTTGACGTTCTCGATAGTGTCGGAAGACTCCACCTCAAGGGTGATAGT 13271 Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || |||||||| ||||| |||||||| ||||| Sbjct 13272 CTTCCCCGTGAGGGTCTTGACGAAGACTTGCAT 13304 >seq58 Length=446738 Score = 102 bits (112), Expect = 2e-16 Identities = 152/213 (71%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAA-AGTTCTCCCATC 151951 ||||| || || ||||| ||| || ||||||||||| ||| |||| ||| | || || Sbjct 376251 AGGACGAGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCG-CTAAGAGTGCGACCGTC 376193 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 || || || |||||||| || | || ||| ||||||| | || || ||||| || Sbjct 376192 CTCGAGCTGCTTGCCGGCGAAAATCAACCGCTGTTGGTCCGGAGGAATACCCTCCTTGTC 376133 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071 ||||| || ||||| | || | |||| ||| || |||||||| || || Sbjct 376132 CTGAATCTTAGACTTGACGATGTCGATCGTGTCGTTCGACTCGACCTCAAGAGTGATCGT 376073 Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||||||||| ||||| ||||||| |||||| Sbjct 376072 CTTGCCCGTGAGTGTCTTGACGAAGATCTGCAT 376040 >seq39 Length=522589 Score = 98.7 bits (108), Expect = 2e-15 Identities = 153/219 (70%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | ||| || ||||| || || ||| || ||||||||||| || | ||| | Sbjct 30020 GAGACGGAGCACGAGATGGAGCGTGCTCTCCTTCTGGATGTTGTAGTCACTCAGAGTACG 29961 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 || || || || || ||||| |||||||| | ||| ||||||| | ||| || || Sbjct 29960 ACCGTCCTCCAGCTGCTTACCGGCAAAGATAAGACGCTGTTGGTCCGGGGGGATACCCTC 29901 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| || || || || ||||| | || | |||| || || ||||| ||||| Sbjct 29900 CTTGTCCTGGATCTTGCTCTTGACGTTTTCGATCGTGTCAGACGATTCGACTTCCAGAGT 29841 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || ||||| ||||| ||||| || ||||||||||| Sbjct 29840 GATCGTCTTGCCAGTGAGGGTCTTGACAAAGACCTGCAT 29802 Score = 98.7 bits (108), Expect = 2e-15 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 |||||||| |||||||| ||| || ||||||||||| ||| | || | || || Sbjct 30241 AGGACAAGGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTGAGCGTGCGGCCGTCC 30182 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || ||||| ||||| || | ||| ||||||| | || || ||||| || Sbjct 30181 TCAAGCTGCTTGCCGGCAAAGATCAGGCGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCC 30122 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || || || ||||| | || | |||| || ||| ||||| || || ||||| Sbjct 30121 TGGATCTTGCTCTTGACGTTTTCGATTGTGTCCGAGGACTCGACTTCGAGCGTGATAGTC 30062 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| || || ||||| ||||| |||||||| Sbjct 30061 TTGCCAGTAAGGGTCTTGACGAACACCTGCAT 30030 Score = 98.7 bits (108), Expect = 2e-15 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 |||||||| || || || ||| || ||||||||||| || | ||| | || || Sbjct 30469 AGGACAAGGTGGAGCGTGCTCTCCTTCTGGATGTTGTAGTCACTCAGAGTACGGCCGTCC 30410 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || ||||| |||||||| | ||| ||||||| | ||| || ||||| || Sbjct 30409 TCCAGCTGCTTGCCGGCAAAGATAAGACGCTGTTGGTCCGGGGGGATACCCTCCTTGTCC 30350 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || || || ||||| | || | |||| || ||| ||||| || || ||||| Sbjct 30349 TGGATCTTGCTCTTGACGTTTTCGATCGTGTCCGAGGACTCAACTTCGAGCGTGATAGTC 30290 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| || || ||||| || ||||||||||| Sbjct 30289 TTGCCAGTAAGGGTCTTGACAAAGACCTGCAT 30258 Score = 89.7 bits (98), Expect = 1e-12 Identities = 148/214 (69%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 ||| ||||| |||||||| ||| || ||||||||||| ||| | || | || || Sbjct 29786 GAGAACAAGGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTGAGCGTGCGGCCGTC 29727 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 || || || ||||| ||||| || | ||| ||||||| | || || ||||| || Sbjct 29726 CTCAAGCTGCTTGCCGGCAAAGATCAGGCGCTGTTGGTCCGGAGGAATGCCCTCCTTGTC 29667 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071 || || || ||||| | || | |||| || ||| ||||| || || ||||| Sbjct 29666 CTGGATCTTGCTCTTGACGTTGTCGATTGTGTCCGAGGACTCGACTTCGAGCGTGATAGT 29607 Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 || || || |||||||| || |||| |||||| Sbjct 29606 CTTTCCAGTAAGAGTCTTTACAAAGATTTGCATT 29573 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153819676466996