Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20cuniculi_20[genbank_20GCA_5F001264635.1_202015-08-11] 76 sequences; 7,459,907 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq39 194 4e-44 seq2 190 4e-43 seq75 179 8e-40 seq58 163 6e-35 seq67 89.7 1e-12 >seq39 Length=522589 Score = 194 bits (214), Expect = 4e-44 Identities = 182/229 (79%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||||||||| ||||| || || || | ||||| || || |||||||||||||| Sbjct 30257 ACCACCACGCAGACGAAGGACAAGGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCT 30198 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||||||||||| ||||| || || || ||||||||||||| || |||||||| || Sbjct 30197 GAGCGTGCGGCCGTCCTCAAGCTGCTTGCCGGCAAAGATCAGGCGCTGTTGGTCCGGAGG 30138 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTT-ACGGTATCGATAGTGTCCGAAGCTTCGA 283050 ||| ||||||||||| |||||||| ||| || ||| | ||||| |||||||| | |||| Sbjct 30137 AATGCCCTCCTTGTCCTGGATCTT-GCTCTTGACGTTTTCGATTGTGTCCGAGGACTCGA 30079 Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||||| ||||| ||||| || || | ||||| ||||| | |||||| Sbjct 30078 CTTCGAGCGTGATAGTCTTGCCAGTAAGGGTCTTGACGAACACCTGCAT 30030 Score = 192 bits (212), Expect = 1e-43 Identities = 182/230 (79%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| ||||| || || || || | ||||| || || |||||||||||||| Sbjct 29801 ACCACCACGAAGGCGGAGAACAAGGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCT 29742 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||||||||||| ||||| || || || ||||||||||||| || |||||||| || Sbjct 29741 GAGCGTGCGGCCGTCCTCAAGCTGCTTGCCGGCAAAGATCAGGCGCTGTTGGTCCGGAGG 29682 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTT-ACGGTATCGATAGTGTCCGAAGCTTCGA 283050 ||| ||||||||||| |||||||| ||| || ||| | ||||| |||||||| | |||| Sbjct 29681 AATGCCCTCCTTGTCCTGGATCTT-GCTCTTGACGTTGTCGATTGTGTCCGAGGACTCGA 29623 Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATT 283100 ||||||| ||||| ||||| || || | |||||| || || || |||||| Sbjct 29622 CTTCGAGCGTGATAGTCTTTCCAGTAAGAGTCTTTACAAAGATTTGCATT 29573 Score = 181 bits (200), Expect = 2e-40 Identities = 179/229 (78%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| || || || || || ||||| | |||||| || || ||||||||||||||| Sbjct 30029 ACCACCGCGGAGACGGAGCACGAGATGGAGCGTGCTCTCCTTCTGGATGTTGTAGTCACT 29970 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || || || ||||| || || || ||||||||||| | ||| |||||||| || Sbjct 29969 CAGAGTACGACCGTCCTCCAGCTGCTTACCGGCAAAGATAAGACGCTGTTGGTCCGGGGG 29910 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTT-ACGGTATCGATAGTGTCCGAAGCTTCGA 283050 |||||||||||||| |||||||| ||| || ||| | ||||| ||||| || | ||||| Sbjct 29909 GATACCCTCCTTGTCCTGGATCTT-GCTCTTGACGTTTTCGATCGTGTCAGACGATTCGA 29851 Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 |||| |||||||||||||| || || | ||||| || || | |||||| Sbjct 29850 CTTCCAGAGTGATCGTCTTGCCAGTGAGGGTCTTGACAAAGACCTGCAT 29802 Score = 176 bits (194), Expect = 9e-39 Identities = 178/229 (78%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| || || ||||| || || || | |||||| || || ||||||||||||||| Sbjct 30485 ACCACCGCGGAGACGAAGGACAAGGTGGAGCGTGCTCTCCTTCTGGATGTTGTAGTCACT 30426 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || ||||| ||||| || || || ||||||||||| | ||| |||||||| || Sbjct 30425 CAGAGTACGGCCGTCCTCCAGCTGCTTGCCGGCAAAGATAAGACGCTGTTGGTCCGGGGG 30366 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050 |||||||||||||| |||||| ||||| || ||| | ||||| |||||||| | || | Sbjct 30365 GATACCCTCCTTGTCCTGGATC-TTGCTCTTGACGTTTTCGATCGTGTCCGAGGACTCAA 30307 Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||||| ||||| ||||| || || | ||||| || || | |||||| Sbjct 30306 CTTCGAGCGTGATAGTCTTGCCAGTAAGGGTCTTGACAAAGACCTGCAT 30258 >seq2 Length=94478 Score = 190 bits (210), Expect = 4e-43 Identities = 179/228 (79%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||||||||| || || || || || | ||||| || || |||||||||||||| Sbjct 13077 ACCACCACGCAGACGCAGCACAAGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCT 13136 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| |||||||||||||| || || || ||||||||||||| || |||||||| || Sbjct 13137 AAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCAAAGATCAGGCGCTGTTGGTCCGGGGG 13196 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 |||||||||||||| ||||||||| | || ||| | ||||||||||| |||| || || Sbjct 13197 GATACCCTCCTTGTCCTGGATCTTTCCCTTGACGTTCTCGATAGTGTCGGAAGACTCCAC 13256 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || ||||| ||||| ||||| | ||||| ||||| | ||||| Sbjct 13257 CTCAAGGGTGATAGTCTTCCCCGTGAGGGTCTTGACGAAGACTTGCAT 13304 >seq75 Length=115788 Score = 179 bits (198), Expect = 8e-40 Identities = 178/228 (78%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 |||||||| || || || || ||||| | |||||| || || ||||| || |||||| Sbjct 54548 CCACCACGGAGACGGAGCACTAGATGGAGCGTGCTCTCCTTCTGGATATTATAGTCACTG 54607 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || |||||||||||||||||||| || || |||||||||| ||| ||||| || ||| Sbjct 54608 AGGGTGCGGCCATCCTCTAGTTGCTTGCCTGCAAAGATCAGACGCTGTTGATCCGGGGGA 54667 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || ||||||||||| |||||| ||||| || ||| | || || || || || | ||||| Sbjct 54668 ATGCCCTCCTTGTCCTGGATC-TTGCTCTTGACGATGTCAATGGTATCGGAGGACTCGAC 54726 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||||||||| ||||| || || | |||||| || || | |||||| Sbjct 54727 CTCGAGAGTGATTGTCTTGCCGGTAAGAGTCTTGACAAAGACCTGCAT 54774 >seq58 Length=446738 Score = 163 bits (180), Expect = 6e-35 Identities = 165/215 (77%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 282885 CGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCA 282944 ||||| || || || | ||||| || || |||||||||||||| ||| ||||| || Sbjct 376254 CGAAGGACGAGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTAAGAGTGCGACCG 376195 Query 282945 TCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTG 283004 ||||| || || || ||||| || ||||| || |||||||| ||||||||||||||| Sbjct 376194 TCCTCGAGCTGCTTGCCGGCGAAAATCAACCGCTGTTGGTCCGGAGGAATACCCTCCTTG 376135 Query 283005 TCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATC 283064 || || ||||| | || ||| | ||||| ||||| | ||||| || ||||||||| Sbjct 376134 TCCTGAATCTTAGACTTGACGATGTCGATCGTGTCGTTCGACTCGACCTCAAGAGTGATC 376075 Query 283065 GTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| ||||| | ||||| ||||| |||||||| Sbjct 376074 GTCTTGCCCGTGAGTGTCTTGACGAAGATCTGCAT 376040 >seq67 Length=473897 Score = 89.7 bits (98), Expect = 1e-12 Identities = 170/248 (69%), Gaps = 2/248 (1%) Strand=Plus/Plus Query 301426 AAAATGGACCCCTATATCAACGTCGATCCGGGGACGATGAGCCCGACTCAACATGGAGAA 301485 || || ||||||||||| ||| ||||| |||| || ||| ||||| | ||||| ||| Sbjct 279212 AAGATCGACCCCTATATGAACATCGATGCGGGAACCATGGCTCCGACCGAGCATGGCGAA 279271 Query 301486 GTGTTCGTGACGGATGATGGTGCTGAAACCGATCTGGATCTGGGGCACTACGAACGTTTC 301545 ||||| ||| | || || | || ||||||| ||||| || ||||||| || | | Sbjct 279272 GTGTTTGTGCTCAACGACGGCGGCGAGGCCGATCTCGATCTCGGAAACTACGAGCGCTAC 279331 Query 301546 ACTTCAT-TAACCCTTAAGCGTGAAAGTAATTTTACGACTGGCCAAGTTTATTTAAAAGT 301604 || || | || || | ||| || | || | || || ||| | | || | || Sbjct 279332 -CTCGATGTCACACTCATGCGCGACAACAACATCACTACGGGCAAGATCTACCGCGAGGT 279390 Query 301605 TATCGAAAATGAACGCGAAGGTAGCTATCTCGGAAAGACGGTGCAAGTTGTTCCCCACAT 301664 ||||| || || ||| || ||| ||||| ||||||||||| |||| || ||| | Sbjct 279391 CATCGACAAGGAGCGCCGCGGCGACTACCTCGGCAAGACGGTGCAGATTGTGCCTCACCT 279450 Query 301665 CACCGATG 301672 ||||||| Sbjct 279451 TACCGATG 279458 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046738180737704