Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20cuniculi_20[genbank_20GCA_5F001264635.1_202015-08-11] 76 sequences; 7,459,907 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq2 149 5e-31 seq58 138 8e-28 seq39 138 8e-28 seq75 109 4e-19 >seq2 Length=94478 Score = 149 bits (164), Expect = 5e-31 Identities = 172/229 (75%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170 || || | ||| | || ||| ||||| || ||||||||||| ||||||||||| ||| Sbjct 13078 CCACCACGCAGACGCAGCACAAGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTA 13137 Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230 || ||| | || || |||||||| ||||||||||||| ||||| || || | || Sbjct 13138 AGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCAAAGATCAGGCGCTGTTGGTCCGGGGGG 13197 Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCAC 44289 | ||| ||||| ||| ||||| | | | | |||| | || ||||||| || ||||| Sbjct 13198 ATACCCTCCTTGTCCTGGATCTT-TCCCTTGACGTTCTCGATAGTGTCGGAAGACTCCAC 13256 Query 44290 CTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 ||| | || || ||||| |||||||||||||| ||||||| ||||||| Sbjct 13257 CTCAAGGGTGATAGTCTTCCCCGTGAGGGTCTTGACGAAGACTTGCATG 13305 >seq58 Length=446738 Score = 138 bits (152), Expect = 8e-28 Identities = 159/212 (75%), Gaps = 4/212 (2%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || ||||| || ||||||||||| ||||||||||| ||| || ||| |||| || Sbjct 376248 ACGAGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTAAGAGTGCGACCGTCCTCG 376189 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| ||||| || ||||| ||||| || || | ||| | ||| ||||| ||| Sbjct 376188 AGCTGCTTGCCGGCGAAAATCAACCGCTGTTGGTCCGGAGGAATACCCTCCTTGTCCTGA 376129 Query 44249 ATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 ||||| ||| | |||| | || |||||| || || ||||| | || ||||||| Sbjct 376128 ATCTTAGACTTGACGATGT--CGATCGTGTCGTTCGACTCGACCTCAAGAGTGATCGTCT 376071 Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 | |||||||| ||||| |||||||| |||||| Sbjct 376070 TGCCCGTGAGTGTCTTGACGAAGATCTGCATG 376039 >seq39 Length=522589 Score = 138 bits (152), Expect = 8e-28 Identities = 156/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || |||||||| ||||||||||| ||||||||||| ||| ||| ||| |||| || Sbjct 29782 ACAAGGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTGAGCGTGCGGCCGTCCTCA 29723 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| ||||||||||||| ||||| || || | ||| | || ||||| ||| Sbjct 29722 AGCTGCTTGCCGGCAAAGATCAGGCGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTGG 29663 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||| ||| | | | || ||||| | ||| || || || | ||| || |||||| Sbjct 29662 ATCTTGCTCTTGACGTTGTCGATTGTGTCCGAGGACTCGACTTCGAGCGTGATAGTCTTT 29603 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || || ||||| || ||||||||||| Sbjct 29602 CCAGTAAGAGTCTTTACAAAGATTTGCAT 29574 Score = 134 bits (148), Expect = 1e-26 Identities = 155/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || |||||||| ||||||||||| ||||||||||| ||| ||| ||| |||| || Sbjct 30238 ACAAGGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTGAGCGTGCGGCCGTCCTCA 30179 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| ||||||||||||| ||||| || || | ||| | || ||||| ||| Sbjct 30178 AGCTGCTTGCCGGCAAAGATCAGGCGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTGG 30119 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||| ||| | || | || ||||| | ||| || || || | ||| || ||||| Sbjct 30118 ATCTTGCTCTTGACGTTTTCGATTGTGTCCGAGGACTCGACTTCGAGCGTGATAGTCTTG 30059 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || |||||||| ||||| | ||||| Sbjct 30058 CCAGTAAGGGTCTTGACGAACACCTGCAT 30030 Score = 131 bits (144), Expect = 1e-25 Identities = 155/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||| || || |||||||||||||| ||||||||||| || || || |||| || Sbjct 30011 CACGAGATGGAGCGTGCTCTCCTTCTGGATGTTGTAGTCACTCAGAGTACGACCGTCCTC 29952 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 ||||||||| ||||||||||| | |||||| || || | || | ||| ||||| ||| Sbjct 29951 CAGCTGCTTACCGGCAAAGATAAGACGCTGTTGGTCCGGGGGGATACCCTCCTTGTCCTG 29892 Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 ||||| ||| | || | || ||||| | ||||| || |||| || |||||||| Sbjct 29891 GATCTTGCTCTTGACGTTTTCGATCGTGTCAGACGATTCGACTTCCAGAGTGATCGTCTT 29832 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || ||||||||||| || |||| ||||| Sbjct 29831 GCCAGTGAGGGTCTTGACAAAGACCTGCAT 29802 Score = 125 bits (138), Expect = 5e-24 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || ||||| |||||||||||||| ||||||||||| || || || |||| ||| Sbjct 30466 ACAAGGTGGAGCGTGCTCTCCTTCTGGATGTTGTAGTCACTCAGAGTACGGCCGTCCTCC 30407 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| ||||||||||| | |||||| || || | || | ||| ||||| ||| Sbjct 30406 AGCTGCTTGCCGGCAAAGATAAGACGCTGTTGGTCCGGGGGGATACCCTCCTTGTCCTGG 30347 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||| ||| | || | || ||||| | ||| || || || | ||| || ||||| Sbjct 30346 ATCTTGCTCTTGACGTTTTCGATCGTGTCCGAGGACTCAACTTCGAGCGTGATAGTCTTG 30287 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || |||||||| || |||| ||||| Sbjct 30286 CCAGTAAGGGTCTTGACAAAGACCTGCAT 30258 >seq75 Length=115788 Score = 109 bits (120), Expect = 4e-19 Identities = 153/213 (72%), Gaps = 4/213 (2%) Strand=Plus/Plus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||| || || |||||||||||||| ||||| || || || ||| ||| | || || Sbjct 54565 CACTAGATGGAGCGTGCTCTCCTTCTGGATATTATAGTCACTGAGGGTGCGGCCATCCTC 54624 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 || ||||| || |||||||||| |||||| ||||| | || | || ||||| ||| Sbjct 54625 TAGTTGCTTGCCTGCAAAGATCAGACGCTGTTGATCCGGGGGAATGCCCTCCTTGTCCTG 54684 Query 44248 TATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTC 44305 ||||| ||| | |||| | ||||| |||| ||| || ||||| | || || ||| Sbjct 54685 GATCTTGCTCTTGACGATGT--CAATGGTATCGGAGGACTCGACCTCGAGAGTGATTGTC 54742 Query 44306 TTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 || || || || ||||| || |||| |||||| Sbjct 54743 TTGCCGGTAAGAGTCTTGACAAAGACCTGCATG 54775 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359990066558892