Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20cuniculi_20[genbank_20GCA_5F001264635.1_202015-08-11] 76 sequences; 7,459,907 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq2 147 5e-30 seq39 125 2e-23 seq58 118 3e-21 >seq2 Length=94478 Score = 147 bits (162), Expect = 5e-30 Identities = 156/206 (76%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||| | ||||| || || ||||| || || || |||||||| |||||||| || ||| Sbjct 13301 CAAGTCTTCGTCAAGACCCTCACGGGGAAGACTATCACCCTTGAGGTGGAGTCTTCCGAC 13242 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || |||||||||||||| |||||| |||||||| || || ||||| |||||||| || Sbjct 13241 ACTATCGAGAACGTCAAGGGAAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAACAG 13182 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||| ||||| || |||||||| ||||| | || ||| ||| || ||| || Sbjct 13181 CGCCTGATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTTAGCGACTACAACATC 13122 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || || ||||| Sbjct 13121 CAGAAGGAGAGCACTCTCCACCTTGT 13096 >seq39 Length=522589 Score = 125 bits (138), Expect = 2e-23 Identities = 152/207 (73%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || || || ||||| || ||||| || ||||| ||||| || || ||| ||| Sbjct 29577 CAAATCTTTGTAAAGACTCTTACTGGAAAGACTATCACGCTCGAAGTCGAGTCCTCGGAC 29636 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| |||||||| ||||| |||||||| || || || ||||||||||| || Sbjct 29637 ACAATCGACAACGTCAAGAGCAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCAACAG 29696 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||| ||||| || ||||| || || || | || || ||| || ||| || Sbjct 29697 CGCCTGATCTTTGCCGGCAAGCAGCTTGAGGACGGCCGCACGCTCAGCGACTACAACATC 29756 Query 178104 CAAAAAGAATCAACACTGCATCTTGTT 178130 || || || || || || |||||| Sbjct 29757 CAGAAGGAGAGCACTCTTCACCTTGTT 29783 Score = 113 bits (124), Expect = 1e-19 Identities = 145/200 (73%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 177930 TTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATC 177989 ||||| || || || || || || || ||||| ||||| || || ||| ||||| ||| Sbjct 30039 TTCGTCAAGACCCTTACTGGCAAGACTATCACGCTCGAAGTCGAGTCCTCGGACACAATC 30098 Query 177990 GAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTT 178049 || |||||||| ||||| |||||||| || || || ||||||||||| || || || Sbjct 30099 GAAAACGTCAAGAGCAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCAACAGCGCCTG 30158 Query 178050 ATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAA 178109 ||||| ||||| || ||||| || || || | || || ||| || ||| |||| || Sbjct 30159 ATCTTTGCCGGCAAGCAGCTTGAGGACGGCCGCACGCTCAGCGACTACAACATCCAGAAG 30218 Query 178110 GAATCAACACTGCATCTTGT 178129 || || || || ||||| Sbjct 30219 GAGAGCACTCTTCACCTTGT 30238 >seq58 Length=446738 Score = 118 bits (130), Expect = 3e-21 Identities = 139/188 (74%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || ||||| || || |||||||| || ||||| || ||| Sbjct 376043 CAGATCTTCGTCAAGACACTCACGGGCAAGACGATCACTCTTGAGGTCGAGTCGAACGAC 376102 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| | |||||| |||||||||||||| || || || ||||||||||| || Sbjct 376103 ACGATCGACATCGTCAAGTCTAAGATTCAGGACAAGGAGGGTATTCCTCCGGACCAACAG 376162 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | || |||||||| || |||||||| || || | |||||| ||| || ||| || Sbjct 376163 CGGTTGATTTTCGCCGGCAAGCAGCTCGAGGACGGTCGCACTCTTAGCGACTACAACATC 376222 Query 178104 CAAAAAGA 178111 || || || Sbjct 376223 CAGAAGGA 376230 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203730027866744