Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20cuniculi_20[genbank_20GCA_5F001264635.1_202015-08-11] 76 sequences; 7,459,907 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq58 167 2e-36 seq2 163 3e-35 seq75 149 6e-31 seq39 143 2e-29 >seq58 Length=446738 Score = 167 bits (184), Expect = 2e-36 Identities = 165/211 (78%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 || || || || |||||||||||||| ||||| |||||| || ||||| |||| ||| Sbjct 376248 ACGAGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTAAGAGTGCGACCGTCCTCG 376189 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 ||||||||||||||||| |||| ||||||||||||| |||| | |||||||||| || Sbjct 376188 AGCTGCTTGCCGGCGAAAATCAACCGCTGTTGGTCCGGAGGAATACCCTCCTTGTCC-TG 376130 Query 41774 ATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTT 41832 | | || | | |||| | | | |||||| ||||||| ||||| | || ||||| || Sbjct 376129 AATCTTAGACTTGACGATGTCGATCGTGTCGTTCGACTCGACCTCAAGAGTGATCGTCTT 376070 Query 41833 ACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 ||||| || ||||| ||||| ||||||||| Sbjct 376069 GCCCGTGAGTGTCTTGACGAAGATCTGCATG 376039 >seq2 Length=94478 Score = 163 bits (180), Expect = 3e-35 Identities = 173/228 (76%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | ||| || || || |||||||||||||| ||||| |||||| Sbjct 13078 CCACCACGCAGACGCAGCACAAGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTA 13137 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||||| | || ||||||||||||||||| || ||||||||||||||||||| ||| Sbjct 13138 AGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCAAAGATCAGGCGCTGTTGGTCCGGGGGG 13197 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACC 41815 | | |||||||||| ||| ||| ||| | | | ||||||| ||||||||| Sbjct 13198 ATACCCTCCTTGTCCTGGATCTTTCCCTTGACGTTCTCGATAGTGTCGGAAGACTCCACC 13257 Query 41816 TCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 || | || || || || ||||| || ||||| ||||| | |||||| Sbjct 13258 TCAAGGGTGATAGTCTTCCCCGTGAGGGTCTTGACGAAGACTTGCATG 13305 >seq75 Length=115788 Score = 149 bits (164), Expect = 6e-31 Identities = 173/231 (75%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 41634 CGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGG 41693 |||| || || ||||| | ||| ||||| ||||||||||||||||| || |||||||| Sbjct 54546 CGCCACCACGGAGACGGAGCACTAGATGGAGCGTGCTCTCCTTCTGGATATTATAGTCAC 54605 Query 41694 AGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGG 41753 ||||||||| | || || || |||||||| || || ||||| |||||||| |||| || Sbjct 54606 TGAGGGTGCGGCCATCCTCTAGTTGCTTGCCTGCAAAGATCAGACGCTGTTGATCCGGGG 54665 Query 41754 GAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCC 41812 ||| || |||||||||| ||| || ||| |||| | | | || ||| ||||| Sbjct 54666 GAATGCCCTCCTTGTCCTGGATCTTGCTCTT-GACGATGTCAATGGTATCGGAGGACTCG 54724 Query 41813 ACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 ||||| | || || || || || || || ||||| || || | ||||||| Sbjct 54725 ACCTCGAGAGTGATTGTCTTGCCGGTAAGAGTCTTGACAAAGACCTGCATG 54775 >seq39 Length=522589 Score = 143 bits (158), Expect = 2e-29 Identities = 170/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || || | || || || || |||||||||||||| ||||| |||||| | Sbjct 29800 CCACCACGAAGGCGGAGAACAAGGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTG 29741 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| |||| || |||||||||||||| || ||||||||||||||||||| ||| Sbjct 29740 AGCGTGCGGCCGTCCTCAAGCTGCTTGCCGGCAAAGATCAGGCGCTGTTGGTCCGGAGGA 29681 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || |||||||||| ||| || ||| ||| | | | ||||| ||||| || Sbjct 29680 ATGCCCTCCTTGTCCTGGATCTTGCTCTT-GACGTTGTCGATTGTGTCCGAGGACTCGAC 29622 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || | ||| || || || || || || |||||||| || || ||||| Sbjct 29621 TTCGAGCGTGATAGTCTTTCCAGTAAGAGTCTTTACAAAGATTTGCAT 29574 Score = 143 bits (158), Expect = 2e-29 Identities = 170/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | || || || || |||||||||||||| ||||| |||||| | Sbjct 30256 CCACCACGCAGACGAAGGACAAGGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTG 30197 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| |||| || |||||||||||||| || ||||||||||||||||||| ||| Sbjct 30196 AGCGTGCGGCCGTCCTCAAGCTGCTTGCCGGCAAAGATCAGGCGCTGTTGGTCCGGAGGA 30137 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || |||||||||| ||| || ||| ||| | | ||||| ||||| || Sbjct 30136 ATGCCCTCCTTGTCCTGGATCTTGCTCTT-GACGTTTTCGATTGTGTCCGAGGACTCGAC 30078 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || | ||| || || || || || || ||||| ||||| | |||||| Sbjct 30077 TTCGAGCGTGATAGTCTTGCCAGTAAGGGTCTTGACGAACACCTGCAT 30030 Score = 129 bits (142), Expect = 5e-25 Identities = 167/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || ||||| ||||| | ||| ||||| ||||||||||||||||| ||||| ||||| Sbjct 30028 CCACCGCGGAGACGGAGCACGAGATGGAGCGTGCTCTCCTTCTGGATGTTGTAGTCACTC 29969 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || || || |||| || |||||||| ||||| || || || ||||||||||||| ||| Sbjct 29968 AGAGTACGACCGTCCTCCAGCTGCTTACCGGCAAAGATAAGACGCTGTTGGTCCGGGGGG 29909 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | |||||||||| ||| || ||| ||| | | ||||| ||| || || Sbjct 29908 ATACCCTCCTTGTCCTGGATCTTGCTCTT-GACGTTTTCGATCGTGTCAGACGATTCGAC 29850 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||| || ||||| || || || || ||||| || || | |||||| Sbjct 29849 TTCCAGAGTGATCGTCTTGCCAGTGAGGGTCTTGACAAAGACCTGCAT 29802 Score = 120 bits (132), Expect = 3e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || ||||| ||||| | || || || ||||||||||||||||| ||||| ||||| Sbjct 30484 CCACCGCGGAGACGAAGGACAAGGTGGAGCGTGCTCTCCTTCTGGATGTTGTAGTCACTC 30425 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || || || |||| || |||||||||||||| || || || ||||||||||||| ||| Sbjct 30424 AGAGTACGGCCGTCCTCCAGCTGCTTGCCGGCAAAGATAAGACGCTGTTGGTCCGGGGGG 30365 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | |||||||||| ||| || ||| ||| | | ||||| ||||| || Sbjct 30364 ATACCCTCCTTGTCCTGGATCTTGCTCTT-GACGTTTTCGATCGTGTCCGAGGACTCAAC 30306 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || | ||| || || || || || || ||||| || || | |||||| Sbjct 30305 TTCGAGCGTGATAGTCTTGCCAGTAAGGGTCTTGACAAAGACCTGCAT 30258 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462303560811200