Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20dermatis_20[genbank_20GCA_5F001264665.1_202015-08-11] 111 sequences; 7,540,864 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq95 482 2e-131 seq109 131 2e-25 seq14 127 2e-24 seq39 114 1e-20 >seq95 Length=17424 Score = 482 bits (534), Expect = 2e-131 Identities = 624/852 (73%), Gaps = 15/852 (2%) Strand=Plus/Plus Query 116576 GAGCCGCTGCTGCGCGAGAACCCCCGCCGGTTCGTGATTTTCCCCATACAATACCCGGAC 116635 |||||||||||| || ||| || |||||| | ||||| || | |||| || Sbjct 1829 GAGCCGCTGCTGAAGGAAAACAAGTCGCGTTTCGTGCTCTTCCCGATCCGCTACCACGAG 1888 Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||||| ||||||||||||||||||||||| | ||||||| |||||||| Sbjct 1889 ATTTGGCAGATGTACAAGAAGGCCGAGGCGTCGTTCTGGACTGCCGAGGAGATGGACCTG 1948 Query 116696 TCCAAGGACACGAGCGACTGGGAGC---GCTTGAACGACAACGAGCGCCATTTCATCAAG 116752 || |||||| | ||||||||| | || ||||||||||||||||||| || | | Sbjct 1949 TCGAAGGACCTGCACGACTGGGACCACCGCATGAACGACAACGAGCGCCACTTTGTTAGC 2008 Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812 ||||| |||||||| || || || || ||||| || |||||||| ||||| ||||| Sbjct 2009 CACGTCCTGGCCTTCTTTGCTGCATCGGATGGCATTGTTAACGAGAACCTGGTAGAGCGC 2068 Query 116813 TTC-GCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCAT 116871 ||| || | | ||||||||| ||||||||| || || ||||||||||| ||||| || Sbjct 2069 TTCAGCGCCG-AGGTGCAGGCGGCCGAGGCCCGCTGTTTCTACGGCTTCCAGATTATGAT 2127 Query 116872 GGAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGTGCGCTCTTCGGA 116931 ||||||| | |||||||| | ||| || |||||||||||||||| | ||| |||| Sbjct 2128 GGAGAACATCCACTCGGAGACGTACTCACTCCTCATCGACACGTACATCCGCGAGCCGGA 2187 Query 116932 GGAGA---AGCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGC 116988 | || || ||| | || || ||||||||||| || || |||||| | ||||| Sbjct 2188 GCAGCGCGAGTTCC---TCTTTAATGCCATCGAGACTATCCCTGTCGTCAAGCAAAAGGC 2244 Query 116989 CGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAG-GCCGCCTTCGGCGAGCGCCTGGTGG 117047 ||||||||| |||||||||||| | | || || | ||| | ||| ||||||||||| | Sbjct 2245 CGAGTGGGCCCTGCGCTGGATCTCGGACA-AGCGCGCCTCGTTCTCGGAGCGCCTGGTCG 2303 Query 117048 CCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCA 117107 | || || || |||||||| |||| || |||||| |||||| |||| |||||||||| Sbjct 2304 CTTTTGCCGCTGTCGAGGGTATCTTTTTCTCGGGCTCGTTCGCCTCCATCTTTTGGCTCA 2363 Query 117108 AGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGG 117167 ||||||| |||||||||||||||||| | ||| |||||||||||||| | ||||||| Sbjct 2364 AGAAACGTGGCCTCATGCCCGGCCTGTCGTTCTCGAACGAGCTCATCTCGCGTGACGAGG 2423 Query 117168 GTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCG-AGCGCG 117226 | ||||| |||||||| || | |||||| || || | |||| || | | || Sbjct 2424 GCCTGCACACAGACTTTGCGTGCCTCTTGTTCAGCCACCTGAAGAAGCGCGCGCACCCCG 2483 Query 117227 GCGCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCACCGAA 117286 | || || | || |||| || || || || || |||||| ||| | ||||| Sbjct 2484 ACACG-GTGAACCGCATTATCACTGAGGCCGTGGCTATTGAGCAGGACTTTTTGACCGAC 2542 Query 117287 GCGCTGCCGGTGCGTCTGCTGGGACTCAATTGCGAAACGATGTCGCAATACATCGAGTTC 117346 || ||||| || ||| | || | || | |||| || ||||| ||||| Sbjct 2543 GCCCTGCCTGTCTCGCTGATCGGCATGAACGCCCGCCTCATGTGCCAGTACATTGAGTTT 2602 Query 117347 GTCGCCGACAGGCTGCTGCTCGAGCTGGTCGGCGCCAAGCACTACAACACGCCCAACCCG 117406 || || ||| | ||||| || | || | | | |||||||||||||| || | ||||| Sbjct 2603 GTGGCGGACCGCCTGCTTGTCAACCTCGGCAACTCCAAGCACTACAACTCGGCGAACCCC 2662 Query 117407 CTGGACTTTATG 117418 | ||||||||| Sbjct 2663 TTTGACTTTATG 2674 >seq109 Length=10333 Score = 131 bits (144), Expect = 2e-25 Identities = 158/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||| | ||||| || || || || || || || |||||| | || || || | || Sbjct 7436 ATGCAAGTCTTCGTCAAGACCCTTACCGGGAAGACGATCACCCTTGAGGTGGAGTCTTCC 7495 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | |||||| || || | ||||| ||||| |||||| ||||||| Sbjct 7496 GACACGATCGAGAATGTCAAGGCCAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAA 7555 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || || |||| || ||||| |||||||| || | |||||||| | |||||||||| Sbjct 7556 CAGCGCCTGATCTTTGCCGGCAAGCAGCTGGAGGATGGTCGCACCCTGAGCGACTACAAC 7615 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 |||||||||||| ||| || || || ||| |||| Sbjct 7616 ATCCAGAAGGAGAGCACTCTCCACCTTGTGCTGCG 7650 >seq14 Length=35264 Score = 127 bits (140), Expect = 2e-24 Identities = 154/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| || || || || ||||| || |||||| | || ||||| | | Sbjct 12113 ATGCAAATCTTCGTCAAGACTCTGACTGGCAAGACGATCACCCTTGAGGTCGAGTCTTCG 12054 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | |||||| || || | ||||| |||||||| || ||||||| Sbjct 12053 GACACGATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCAA 11994 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || || |||| ||| || || ||||| || || | |||||||| | |||||||||| Sbjct 11993 CAGCGTCTGATCTTCGCTGGTAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTACAAC 11934 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899 || ||||||||| ||| ||||| || ||| Sbjct 11933 ATTCAGAAGGAGAGCACCCTGCACCTCGTG 11904 >seq39 Length=95809 Score = 114 bits (126), Expect = 1e-20 Identities = 107/136 (79%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 40783 GACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGAC 40842 ||||| |||||||| || |||||||||| || || |||| |||||||| |||||||| Sbjct 16625 GACAAGGAGGGCATTCCGCCGGACCAGCAGCGCCTGATCTTTGCGGGCAAGCAGCTGGAG 16684 Query 40843 GACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTG 40902 |||| ||| || || | ||||||||| |||||||||||| ||| |||| || || || Sbjct 16685 GACGGGCGTACTCTGAGCGACTACAATATCCAGAAGGAGAGCACATTGCACCTCGTCCTG 16744 Query 40903 CGCTTGAGGGGCGGCG 40918 || ||| | || |||| Sbjct 16745 CGTTTGCGCGGTGGCG 16760 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515218485133360