Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20dermatis_20[genbank_20GCA_5F001264665.1_202015-08-11] 111 sequences; 7,540,864 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq14 114 1e-20 seq39 113 5e-20 seq109 96.9 4e-15 >seq14 Length=35264 Score = 114 bits (126), Expect = 1e-20 Identities = 147/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 42981 TGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGC 43040 |||| ||||||||||| ||||| ||||| || ||| || || | || || |||||| Sbjct 11911 TGCAGGGTGCTCTCCTTCTGAATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGC 11970 Query 43041 TTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTT 43100 ||||||||||| || || ||||| ||||| | || | || |||||||||| ||| || Sbjct 11971 TTACCAGCGAAGATCAGACGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATCTTG 12030 Query 43101 TGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTT 43160 |||| | | | |||||| || || || || | ||||| || ||||| || Sbjct 12031 GCCTTGACATTGTCGATCGTGTCCGAAGACTCGACCTCAAGGGTGATCGTCTTGCCAGTC 12090 Query 43161 AGCGTCTTTACAAAGATTTGCAT 43183 || ||||| || ||||||||||| Sbjct 12091 AGAGTCTTGACGAAGATTTGCAT 12113 >seq39 Length=95809 Score = 113 bits (124), Expect = 5e-20 Identities = 173/246 (70%), Gaps = 28/246 (11%) Strand=Plus/Minus Query 42966 AAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGC 43025 ||||||| || | ||||||||||||||||| || |||||||| || |||||| ||| Sbjct 16749 AAACGCAGGACGAGGTGCAATGTGCTCTCCTTCTGGATATTGTAGTCGCTCAGAGTACGC 16690 Query 43026 TCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCC 43085 |||| || |||||||| || || || || || ||||||||||| | ||| | || |||| Sbjct 16689 CCGTCCTCCAGCTGCTTGCCCGCAAAGATCAGGCGCTGCTGGTCCGGCGGAATGCCCTCC 16630 Query 43086 TTGTCCATGATTTT----TTG--------TTTGAGCGTCGC------CACCGTG-TCGCT 43126 |||||| ||| || ||| | | |||||| ||| || ||| | Sbjct 16629 TTGTCCTGGATCTTGGTCTTGACTACCTCGGTTACCGTCGCTCCACGTACCATGCTCGAT 16570 Query 43127 CGATTC--------CACA-TCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGAT 43177 ||| || |||| || | |||||| |||||||| || |||||||| ||||| || Sbjct 16569 CGAGTCGCTGCTCTCACACTCCAGCGTGATCGTTTTGCCGGTCAGCGTCTTAACAAATAT 16510 Query 43178 TTGCAT 43183 ||||| Sbjct 16509 CTGCAT 16504 >seq109 Length=10333 Score = 96.9 bits (106), Expect = 4e-15 Identities = 151/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 ||||| ||| | || | ||||||||||| || || ||||| || ||| || || | Sbjct 7651 ACGCAGCACAAGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGACC 7592 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 || || |||||||| || || || || || ||||| ||||| | || | | |||||| Sbjct 7591 ATCCTCCAGCTGCTTGCCGGCAAAGATCAGGCGCTGTTGGTCCGGGGGGATACCCTCCTT 7532 Query 43088 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGAT 43147 |||| ||| || |||| || | | ||||||| || ||||| || | ||||| Sbjct 7531 GTCCTGGATCTTGGCCTTGACATTCTCGATCGTGTCGGAAGACTCCACCTCAAGGGTGAT 7472 Query 43148 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || || || || || ||||| || |||| |||||| Sbjct 7471 CGTCTTCCCGGTAAGGGTCTTGACGAAGACTTGCAT 7436 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571816806603080