Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20dermatis_20[genbank_20GCA_5F001264665.1_202015-08-11] 111 sequences; 7,540,864 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq14 149 5e-31 seq109 136 3e-27 seq39 89.7 4e-13 >seq14 Length=35264 Score = 149 bits (164), Expect = 5e-31 Identities = 156/205 (76%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192 |||||| ||||||||||||||||||||||||||| |||| ||| | || || || || Sbjct 11910 GTGCAGGGTGCTCTCCTTCTGAATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTG 11969 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252 || || ||||| |||| ||||||||||| ||||| | |||||||||||| || || Sbjct 11970 CTTACCAGCGAAGATCAGACGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATCTT 12029 Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312 ||| || | | ||||| | ||| ||||| | ||| ||||||||||| || Sbjct 12030 GGCCTTGACATTGTCGATCGTGTCCGAAGACTCGACCTCAAGGGTGATCGTCTTGCCAGT 12089 Query 45313 CAGAGTCTTCACAAAGATTTGCATG 45337 ||||||||| || |||||||||||| Sbjct 12090 CAGAGTCTTGACGAAGATTTGCATG 12114 >seq109 Length=10333 Score = 136 bits (150), Expect = 3e-27 Identities = 153/205 (75%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192 ||| || |||||||||||||| |||||||||||| |||| |||| | || ||||| || Sbjct 7639 GTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGACCATCCTCCAGCTG 7580 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252 || ||||| || |||| ||||||||||| || || | ||||||||||||| || || Sbjct 7579 CTTGCCGGCAAAGATCAGGCGCTGTTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTT 7520 Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312 ||| || | | | |||| | ||||||||| | ||| |||||||| || || Sbjct 7519 GGCCTTGACATTCTCGATCGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTCCCGGT 7460 Query 45313 CAGAGTCTTCACAAAGATTTGCATG 45337 || ||||| || |||| ||||||| Sbjct 7459 AAGGGTCTTGACGAAGACTTGCATG 7435 >seq39 Length=95809 Score = 89.7 bits (98), Expect = 4e-13 Identities = 102/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 45108 CGCCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGT 45167 ||||||| | ||| | | || | ||||| |||||||||||||| || ||||||||| Sbjct 16760 CGCCACCGCGCAAACGCAGGACGAGGTGCAATGTGCTCTCCTTCTGGATATTGTAGTCGC 16701 Query 45168 TCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAG 45227 |||| || |||| ||||| || || || || || |||| ||||| ||||| || | Sbjct 16700 TCAGAGTACGCCCGTCCTCCAGCTGCTTGCCCGCAAAGATCAGGCGCTGCTGGTCCGGCG 16641 Query 45228 GCACACCCTCCTTGTCC 45244 | | |||||||||||| Sbjct 16640 GAATGCCCTCCTTGTCC 16624 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395074665537331