Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20dermatis_20[genbank_20GCA_5F001264665.1_202015-08-11] 111 sequences; 7,540,864 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq73 114 2e-20 seq95 89.7 7e-13 >seq73 Length=43552 Score = 114 bits (126), Expect = 2e-20 Identities = 525/823 (64%), Gaps = 10/823 (1%) Strand=Plus/Plus Query 72106 AGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCC 72165 ||||| | |||| | | | || || ||||| || |||| ||| || || | | || Sbjct 36699 AGATCAATGAACTCAAACACGTCCGAGTGCCATGGCTCCAGGTAAATCGCAAAGGCGCCG 36758 Query 72166 GGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATT 72225 || || ||||| || ||||| || | ||| | || ||||| || || || | | ||| Sbjct 36759 GGGCGCTTGTTGCCACCCTGGTCCACGTAGCGCGCTGTGTTGTTGTACACGCGAAGCATG 36818 Query 72226 GGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATA 72285 || | |||||| ||| |||| || || |||| || || || | || || || Sbjct 36819 GGCACAATACCGTTGCTCACACCGTTCGTACCGGCAATGTACGAGCCCGTCGCGCGGATG 36878 Query 72286 TTGCTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAA- 72344 ||| || || || || || || ||| | || ||| | || || ||| |||| Sbjct 36879 TTGTGGATGTTCAGGCCAATACCACCGGCCGTCTTGCTGATCATCGCACA-CGTCTTAAG 36937 Query 72345 CGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACAT 72404 ||| ||||| || ||||| || || ||| ||||| | | || || ||| ||||| Sbjct 36938 CGTGTCATAAATACCCTCAATCGAGTCGTCCTTCATGCTCACAAGGAAGCAGGACGACAT 36997 Query 72405 TTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTC 72464 |||| | || || ||||| || | ||| || || ||||||||||| || || Sbjct 36998 TTGGGGGTTGGGCGTGCCAGCATTGAACAGGGTCGGCGACGCGTGCGTAAAGGCCTTCTC 37057 Query 72465 AGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTGATGTATTCCTACCGC 72524 |||| | ||||||||||| || || | | |||| || || || | || Sbjct 37058 GGACATGAAGTTGTACGTCTCGATCGCGCTCTTCACATCCTCGCCGTGGATGCCCATAGC 37117 Query 72525 GACACGCATTAACATATGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTA 72584 ||||||||| | ||| ||||| || | || ||| |||| || || | || ||| Sbjct 37118 GACACGCATAAGCATGTGCTGGGGGCGCTCCGCGACCTTGCCGTTGATCCGTAGCAGGTA 37177 Query 72585 GGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAAT 72644 ||| |||| || || || ||||| ||||||| |||||| || ||||| || | Sbjct 37178 GGAACGCTCCAGCGTCTTGAAGCCAAAGAAGTTGTAGTGAAAGTCGCGCTCGTAGATGAC 37237 Query 72645 AACCGAATTGAGTTTATCCTTATATTTGTTAACTATATCCATGGTGATACTT-GAAATAA 72703 |||| | ||| | || | || | || || || | ||| || || | Sbjct 37238 GGCCGAGTCGAGCGTGTCGCGGTTCTTCATCACGGCCTCGTACGT-CTCCTTGGAGATCA 37296 Query 72704 TCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCAC 72763 | || ||||||| | || || || ||||||| | | | || | || ||| | | Sbjct 37297 TAGGGCTGTGTTTCCTCGTCTTGGGGTTCACATAGTCGTACAGGTCTTGCACCACATGGC 37356 Query 72764 TAAATAGtttttttGTTTCCTTGTGTAGATT--TGATACGGCTATTCTGGCGGCTAGAAT 72821 |||| | || || ||||||||||| || || |||| || || | || || || | Sbjct 37357 TAAAGTGCTTCTTGGTTTCCTTGTGCAGGTTGCTGAT--TGCGATACGCGCCGCGAGCAC 37414 Query 72822 GGCATAATCTGGATGTTGTGTAGTACAAGT-GGCTGCTATTTCTGCTGCCAGAGTGTCCA 72880 ||| || ||||| || ||||| | || || || | || || || ||| |||||| Sbjct 37415 GGCGTAGTCTGGGTGGGTGGTAGT-CTTGTACGCCGCCGTCTCAGCCGCGAGATTGTCCA 37473 Query 72881 ATTCTACCGTTGTTACTCCATTATATATTCCTTGGATAACCTT 72923 ||| ||||| || || || | || || || | ||| || || Sbjct 37474 GTTCGACCGTGGTCACACCCTCGTAGATGCCATCGATCACTTT 37516 >seq95 Length=17424 Score = 89.7 bits (98), Expect = 7e-13 Identities = 161/232 (69%), Gaps = 5/232 (2%) Strand=Plus/Minus Query 42079 GTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCC 42138 |||||| ||||| || | || | ||||| || |||| || |||||||| ||||| Sbjct 2431 GTGCAGGCCCTCGTCACGCGAGATGAGCTCGTTCGAGAACGACAGGCCGGGCATGAGGCC 2372 Query 42139 ACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCCTTCTACTGC 42198 ||| || || |||||||| || || || || || || || || ||||| || || || || Sbjct 2371 ACGTTTCTTGAGCCAAAAGATGGAGGCGAACGAGCCCGAGAAAAAGATACCCTCGACAGC 2312 Query 42199 CGCAAAGGCAATAAGTCTCTCTCCATAACC-GGCAC---TGTCATGTATCCACTTTTGAG 42254 ||||| || | || | ||| | | ||| ||| | |||| ||||| | | Sbjct 2311 GGCAAAAGCGACCAGGCGCTC-CGAGAACGAGGCGCGCTTGTCCGAGATCCAGCGCAGGG 2253 Query 42255 CCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAG 42306 |||| |||||||| | || || ||| || || || |||||||||||||| Sbjct 2252 CCCACTCGGCCTTTTGCTTGACGACAGGGATAGTCTCGATGGCATTAAAGAG 2201 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671138268794360