Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20dermatis_20[genbank_20GCA_5F001264665.1_202015-08-11] 111 sequences; 7,540,864 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq95 89.7 5e-13 >seq95 Length=17424 Score = 89.7 bits (98), Expect = 5e-13 Identities = 287/437 (66%), Gaps = 9/437 (2%) Strand=Plus/Plus Query 50422 GTGGCGTTTGCCATAGTTGAAGGTGTGtttttttCCGGTAGCTTTGCAGCCATATTTTAC 50481 || || |||||| || || ||| | ||||| || || || || |||| |||| Sbjct 2300 GTCGCTTTTGCCGCTGTCGAGGGTATCTTTTTCTCGGGCTCGTTCGCCTCCATCTTTTGG 2359 Query 50482 ATTAA-AACCTTAGGCATAATGCCCGGCCTCACGTTTAGCAACGAGTTGATTTCGCGCGA 50540 | || || | | ||| | ||||||||||| |||| |||||| | || ||||| || Sbjct 2360 CTCAAGAAACGT-GGCCTCATGCCCGGCCTGTCGTTCTCGAACGAGCTCATCTCGCGTGA 2418 Query 50541 CGAAGGAATGCACACAGACTTTGCGTGTTTGTACTACAATACGCGCGTAAATGAAAAATT 50600 ||| || ||||||||||||||||||| | | | || | | | || ||| Sbjct 2419 CGAGGGCCTGCACACAGACTTTGCGTGCCTCTTGTTCAGC---CACCTGAA-GAAGCGCG 2474 Query 50601 ATCATAC-GAAACAATTTTGGACATGTTCAAAGAAGCCGTCGACATCGAAAAAGAGTTTT 50659 || | || || | ||| ||| || ||||| | || || | || |||| Sbjct 2475 CGCACCCCGACACGGTGAACCGCATTATCACTGAGGCCGTGGCTATTGAGCAGGACTTTT 2534 Query 50660 TCACGGACGCTTTACCCGTGGCATTGTTGGGCATGAACGCAGACATGATGTGCGAGTACA 50719 | || ||||| | || || | || | ||||||||||| | | |||||| |||||| Sbjct 2535 TGACCGACGCCCTGCCTGTCTCGCTGATCGGCATGAACGCCCGCCTCATGTGCCAGTACA 2594 Query 50720 TTGAGTTTGTTGCAGACAGATTGTTGTTGCAGCTGGGACAAC-CGAAATACTATAATGCA 50778 |||||||||| || ||| | || | | | || || |||| | || |||| || | Sbjct 2595 TTGAGTTTGTGGCGGACCGCCTGCTTGTCAACCTCGG-CAACTCCAAGCACTACAACTCG 2653 Query 50779 CGTAACCCCTTTCCGTTTATGAATAACATATCGTTGGAGGGCAAAACAAACTTTTTCGAA 50838 ||||||||| |||||| | ||||| ||| | ||||||| |||||||||| || Sbjct 2654 GCGAACCCCTTTGACTTTATGGAGAACATTTCGCTCCAGGGCAAGTCAAACTTTTTTGAG 2713 Query 50839 AGACGTGTAGGCGAATA 50855 | || || | ||| || Sbjct 2714 CGCCGCGTTGCCGACTA 2730 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 507013696517520