Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20dermatis_20[genbank_20GCA_5F001264665.1_202015-08-11] 111 sequences; 7,540,864 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq95 244 2e-59 seq73 192 9e-44 >seq95 Length=17424 Score = 244 bits (270), Expect = 2e-59 Identities = 574/859 (67%), Gaps = 18/859 (2%) Strand=Plus/Plus Query 124999 TTCCC-ATCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGG 125057 ||||| ||| | || || || |||||| | |||||||| ||||| |||| || || ||| Sbjct 1868 TTCCCGATCCGCTACCACGAGATTTGGCAGATGTACAAGAAGGCCGAGGCGTCGTTCTGG 1927 Query 125058 ACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAA 125117 || | ||| ||| | || ||||| ||||||||| |||| ||||| || ||| || Sbjct 1928 ACTGCCGAGGAGATGGACCTGTCGAAGGACCTGCACGACTGGGACCACCGCATGAACGAC 1987 Query 125118 ACTGAGCGAGAGTTTATATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTC 125177 | ||||| | ||| | ||| | ||||||||||||| | || ||||| || || Sbjct 1988 AACGAGCGCCACTTTGTTAGCCACGTCCTGGCCTTCTTTGCTGCATCGGATGGCATTGTT 2047 Query 125178 AACGACAATCTGTTGACACGATTCTCTCAAGAGTTGACCATTC--CAGAGGTGTCGTGCT 125235 ||||| || ||| | || ||| ||| || || | | |||| || | Sbjct 2048 AACGAGAACCTGGTAGAGCGCTTCAGCGCCGAGGTG--CAGGCGGCCGAGGCCCGCTGTT 2105 Query 125236 TTTACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTG 125295 | ||||| ||||| || ||||| |||||| | |||||||| | |||||| || || | Sbjct 2106 TCTACGGCTTCCAGATTATGATGGAGAACATCCACTCGGAGACGTACTCACTCCTCATCG 2165 Query 125296 ACATGTACATTCGCGATCCGCAACGTAAACACATGCTCTTTAACGCAATCGACACGGTGC 125355 ||| |||||| ||||| ||| | | | | |||||||| || ||||| || | | Sbjct 2166 ACACGTACATCCGCGAGCCGGAGCAGCGCGAGTTCCTCTTTAATGCCATCGAGACTATCC 2225 Query 125356 C-GTCTATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCG 125414 | ||| | | |||| ||| | |||| | || |||||| ||| | | ||| Sbjct 2226 CTGTCGTCAAGCAAAA-GGCCGAGTGGGCCCTGCGCTGGATCTCGGACAAGCGCGCCTCG 2284 Query 125415 TACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTT 125474 | | | || | ||||| || || ||||| || ||||| ||||| || ||||| || Sbjct 2285 TTCTCGGAGCGCCTGGTCGCTTTTGCCGCTGTCGAGGGTATCTTTTTCTCGGGCTCGTTC 2344 Query 125475 GCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAG 125534 || ||||||||||||||||||| || || ||||||||||| ||| || | |||||| Sbjct 2345 GCCTCCATCTTTTGGCTCAAGAAACGTGGCCTCATGCCCGGCCTGTCGTTCTCGAACGAG 2404 Query 125535 TTTATATCTCGAGACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTTTCGCAACTAT 125594 | || || || ||||||||||| ||| |||||||| || |||| || | | Sbjct 2405 CTCATCTCGCGTGACGAGGGCCTGCACACAGACTTTGCGTGCCTCTTGTT---CAGCCAC 2461 Query 125595 CTG-CGTCCCGAGTGCAGATCCAGCGATGAAAAGGTCATCAACATTGTAACCGATGCCGT 125653 ||| | || | ||| | || | ||| | | |||| | || || ||||| Sbjct 2462 CTGAAGAAGCGCGCGCA-------CCCCGACACGGTGAACCGCATTATCACTGAGGCCGT 2514 Query 125654 GAGGATAGAACAAGAGTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTG 125713 | || || || || ||| | ||||| |||| || ||| |||| ||||||||| Sbjct 2515 GGCTATTGAGCAGGACTTTTTGACCGACGCCCTGCCTGTCTCGCTGATCGGCATGAACGC 2574 Query 125714 CAAGCTAATGTGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGG 125773 | || |||||| ||||||| ||||||||||| || || || || | | | Sbjct 2575 CCGCCTCATGTGCCAGTACATTGAGTTTGTGGCGGACCGCCTGCTTGTCAACCTCGGCAA 2634 Query 125774 CCGCAAGATTTACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGG 125833 | |||| |||||| | ||| |||||||| || ||| | ||| || || |||| Sbjct 2635 CTCCAAGCACTACAACTCGGCGAACCCCTTTGACTTTATGGAGAACATTTCGCTCCAGGG 2694 Query 125834 TAAGACCAACTTTTTCGAG 125852 ||| | |||||||| ||| Sbjct 2695 CAAGTCAAACTTTTTTGAG 2713 >seq73 Length=43552 Score = 192 bits (212), Expect = 9e-44 Identities = 334/483 (69%), Gaps = 2/483 (0%) Strand=Plus/Minus Query 96876 CAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGAC 96935 ||||| ||||| || || || ||||| | || | ||| |||| || |||||| ||||| Sbjct 36778 CAGGGTGGCAACAAGCGCCCCGGCGCCTTTGCGATTTACCTGGAGCCATGGCACTCGGAC 36719 Query 96936 GTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGAC 96995 || ||||| || || || ||||||| ||| ||| || |||| || || | ||| Sbjct 36718 GTGTTTGAGTTCATTGATCTGCGCAAGAACCATGGTAAGGAGGAGGTGCGTGCGCGCGAC 36659 Query 96996 TTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGACGGTGGCTAC 97055 |||| || || ||||| || || ||||||||| ||||| | | ||| || Sbjct 36658 CTGTTCCTGGCGCTGTGGGTTCCCGACTTGTTCATGCGCCGCGTTGAGCAGAACGGCGAC 36599 Query 97056 TGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAGTTT 97115 ||| || |||||||||| || || || ||| |||| |||| || || |||||| Sbjct 36598 TGGTCGCTGATGTGCCCCGCTGAGTGCCCGGGCCTGGCCGACTGCTATGGTGAGGAGTTT 36539 Query 97116 GAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCGATACGTGAGACGAGTCGATGCACGA 97175 || || |||| | ||||||| |||||||| | | | || | || | | Sbjct 36538 GATGCTCTGTACGAGAAATACGAGCGCGAGGGCCGCGCCAAGCGCTCTGTTAAGGCGC-A 36480 Query 97176 GAA-CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTCTCTA 97234 ||| |||||| | ||||| | ||| ||| | ||||| || | || | ||| || || Sbjct 36479 GAAGCTGTGGTACGCCATTCTCGAGGCGCAGATCGAGACGGGCAACCCCTTCATCCTGTA 36420 Query 97235 CAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGCTCCAA 97294 |||||| | | || ||||| |||||||| || ||||||| |||||| |||| || Sbjct 36419 CAAGGACTCGGCAAACCGCAAGAGCAACCAGAAGAACCTGGGCACGATCAAGAGCTCGAA 36360 Query 97295 TCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCAGTTTGCGTTCTGGC 97354 |||||||||| ||| | |||||| ||| |||||||||||||| || ||| ||||| Sbjct 36359 CTTGTGCACGGAGATTATCGAGTACAGCTCGCCGGACGAGACGGCTGTGTGCAACCTGGC 36300 Query 97355 ATC 97357 ||| Sbjct 36299 ATC 36297 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741058171780360