Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20dermatis_20[genbank_20GCA_5F001264665.1_202015-08-11] 111 sequences; 7,540,864 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq95 132 1e-25 seq75 132 1e-25 seq57 96.9 7e-15 >seq95 Length=17424 Score = 132 bits (146), Expect = 1e-25 Identities = 393/596 (66%), Gaps = 19/596 (3%) Strand=Plus/Minus Query 251554 ACACGGCGTTCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAG 251613 || ||||| || || || || |||||||||| || || || |||||| ||||| ||| Sbjct 2721 ACGCGGCGCTCAAAAAAGTTTGACTTGCCCTGGAGCGAAATGTTCTCCATAAAGTCAAAG 2662 Query 251614 GGGTTTGTGGCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACA 251673 ||||| | | ||||| ||||||| | ||| || || | | |||||| |||||| Sbjct 2661 GGGTTCGCCGAGTTGTAGTGCTTGGAGTTGCCGAGGTTGACAAGCAGGCGGTCCGCCACA 2602 Query 251674 AACTCCAGATACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACA-AGGAATTGC 251732 ||||| | ||||| | ||| || | ||||||||| |||| ||| | ||| | || Sbjct 2601 AACTCAATGTACTGGCACATGAGGCGGGCGTTCATGCCGATCA-GCGAGACAGGCAGGGC 2543 Query 251733 CTCACAGATGAATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCTTCACCTGTGC 251792 || | || |||| || | || || ||||| | ||| |||||| ||| Sbjct 2542 GTCGGTCAAAAAGTCCTGCTCAATAGCCACGGCCTCAGTGATAATGCGGTTCACC-GTGT 2484 Query 251793 CAGAGACAGCTTG-TTCTCCAGCTTTGAGTACAGGA-GCTCGCCAAACTGTTGGTGCAGA 251850 | | | || | |||| ||| | | ||| || || || |||| | | |||||| Sbjct 2483 CGGGGTGCGCGCGCTTCTTCAGGTGGCTGAACAAGAGGCACG-CAAAGTCTGTGTGCAGG 2425 Query 251851 CCCTCGTCGCGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTC 251910 |||||||| || ||||| |||||| || | |||||| ||||| | ||||| ||| Sbjct 2424 CCCTCGTCACGCGAGATGAGCTCGTTCGAGAACGACAGGCCGGGCATGAGGCCACGTTTC 2365 Query 251911 CTGAGCCAGAAGATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGACACACACCCAT 251970 ||||||| ||||| | | || || || ||||| | | |||||||||| | | Sbjct 2364 TTGAGCCAAAAGATGGAGGCGAACGAGCCCGAGAAAAAGATACCCTCGACAGCGGCAAAA 2305 Query 251971 GCAACAAGGCGCTCAGCAAACGA------CTTGTCCTGCGACAAGAACTTCTGTGCCCAT 252024 || || |||||||| | ||||| |||||| ||| | | | | ||||| Sbjct 2304 GCGACCAGGCGCTCCGAGAACGAGGCGCGCTTGTC---CGAGATCCAGCGCAGGGCCCAC 2248 Query 252025 GCTGCCTTCTTTCCAACCGCGGGGATTGTTTCGATTGCATCAAAGAGAGAGTTCCGCTCG 252084 | ||||| | || | ||||| || ||||| |||| |||||| | | ||| | Sbjct 2247 TCGGCCTTTTGCTTGACGACAGGGATAGTCTCGATGGCATTAAAGAGGAACT--CGCGCT 2190 Query 252085 GCATCG--TCCTCGATGAGCGCATCAAGCAGGAGAGAGTACATCTCCGAATGGATG 252138 || || || |||| || || | ||||| |||||| ||||||| |||||| Sbjct 2189 GCTCCGGCTCGCGGATGTACGTGTCGATGAGGAGTGAGTACGTCTCCGAGTGGATG 2134 >seq75 Length=190775 Score = 132 bits (146), Expect = 1e-25 Identities = 403/615 (66%), Gaps = 22/615 (4%) Strand=Plus/Minus Query 218402 GCGAGCTCATCGACCGATCTTTCAACAAGTCTCGTCCTGATGAGCGCAAGACCTGGCTGC 218461 |||| ||| | |||| | ||||||||| | ||||| |||||| ||||||| Sbjct 183063 GCGATCTCGTGGACCTCGCGTTCAACAAGAAAAAGGCCGATGACCGCAAGGAGTGGCTGC 183004 Query 218462 TCGACTTCCAGCCCGGAAACCAGTTGGACCAGTCGAAGAC-CAACATCCCCGTCCCTGAC 218520 | | || ||| || | | | | ||||| || | | | | |||||| || | ||| Sbjct 183003 GCCAGTTTGTGCCGGGCACCTACCTTGACCAC-CGCATCCGCCAGATCCCCATCTCGGAC 182945 Query 218521 TTCATCGACAAGGAGCTCATTCTTTTCTC----GCGGTATGATGTGGAGCGTTCTATTCC 218576 || ||| |||| || || || || ||||| |||| | || | || || || || Sbjct 182944 TTTATCAACAAAGAACTGATCCTCTTCTCCATGGCGG-ACAATATC---CGCTCGATCCC 182889 Query 218577 CAGCGTGGTGGATGGCCTCAAGCCATCGCAGCGTAAGATCCTCTTTGCCGCATTCAAGCG 218636 |||||| || ||||||||||| || ||||| ||| |||| || | | |||||||| Sbjct 182888 CAGCGTCGTCGATGGCCTCAAACCGGGCCAGCGCAAGGTCCTGTTCGGCTGCTTCAAGCG 182829 Query 218637 GAACCTGGTTCAAGA----AATTAAGGTCGCTCAGTTTTCTGGTTATGTATCCGAAATTT 218692 ||||| ||||| ||| ||||| ||| | || || || || || Sbjct 182828 CAACCT----CAAGACGGAAATCAAGGTGCAACAGCTGCAGGGCTACGTGTCGGAGCACA 182773 Query 218693 CTGGCTACCATCACGGTGAGCAGAGTCTG--CAGGGTGCCATTGTAGGCATGGCACAGGA 218750 | | ||||| ||||| || ||||||||| || | | || || || | ||||| || Sbjct 182772 CGGCGTACCACCACGGCGACCAGAGTCTGGTCATGACG--ATCGTCGGTCTCGCACAAGA 182715 Query 218751 CTATGTGGGCAGTAACAACATGAACTTGCTGCTCCCCAACGGTCAGTTTGGTTCTCGTCT 218810 || | ||||| ||||| |||| |||| | |||||||| ||||||||| | ||| Sbjct 182714 CTTTTGCGGCAGCAACAATGTGAATATGCTCATGCCCAACGGCCAGTTTGGTACGCGTAG 182655 Query 218811 ATTGGGTGGAAAGGATAGTGCTTCTGCCAGGTATATCTTTACAAAGTTGTCGCCCGTGAC 218870 |||| || |||||| || ||| | || || || || || ||| | | || Sbjct 182654 TATGGGCGGCAAGGATGCGGCCAGCGCCCGTTACATTTTCACTGCCGTGCCGCGCATTAC 182595 Query 218871 GCGCCAGGTGTTCAATCAGGCCGATGATGTGCTCCTTAAGTATCTTGAGGACGATGGTTC 218930 ||||||| | ||| ||| | || || | ||| || || || ||||| || || || Sbjct 182594 GCGCCAGCTCTTCCATCCGAAGGACGACGCGCTGCTCAACTACCTTGACGAGGACGGGCA 182535 Query 218931 TTCGATTGAGCCCGAGTGGTATGTGCCTGCTATTCCGTTTTTGCTCGTAAATGGTGCCAA 218990 || |||||||||||||| ||||| | | ||| ||||| | || || ||| | Sbjct 182534 GAGCATCGAGCCCGAGTGGTACGTGCCGGTCGTACCGCAGGTGCTCCTCAACGGCGCCGA 182475 Query 218991 TGGTATCGGGACAGG 219005 |||||||| || || Sbjct 182474 CGGTATCGGCACGGG 182460 >seq57 Length=56119 Score = 96.9 bits (106), Expect = 7e-15 Identities = 138/194 (71%), Gaps = 3/194 (2%) Strand=Plus/Plus Query 279705 CTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACTGCGTGCCGAT 279764 |||||||||||||||||||||||||| || || | || ||| | || | ||||| Sbjct 16080 CTGTCGGGTGGTTGGAAGATGAAGCTCGCTCTGGCCCGTGCCGTGCTCTTCAAGGCCGAC 16139 Query 279765 GTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAGCCTGGCTAGTG 279824 | || ||||| |||||||| ||||||||| ||||| || |||||| |||||| | | Sbjct 16140 ATTCTGCTGCTGGATGAGCCGACCAACCACTTGGACGTCATCAACGTGGCCTGGATCACG 16199 Query 279825 TCCTACCTAACCAGTCTGAAGAATGTTTCTTCCCTCATTGTCTCTCACGACTCTGGCTTC 279884 |||||| || || || || | || ||||||| || |||||||| ||| Sbjct 16200 GACTACCTGCGCA---CGACGAGTGCCACCTCGATCATTGTGTCGCACGACTCCAAGTTC 16256 Query 279885 CTAGATGCCGTGTG 279898 || | | |||||| Sbjct 16257 CTGAACGACGTGTG 16270 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027835338223351