Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20dermatis_20[genbank_20GCA_5F001264665.1_202015-08-11] 111 sequences; 7,540,864 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq109 91.5 1e-13 seq39 91.5 1e-13 >seq109 Length=10333 Score = 91.5 bits (100), Expect = 1e-13 Identities = 104/137 (76%), Gaps = 2/137 (1%) Strand=Plus/Minus Query 33900 ACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGC 33959 ||| || | ||| |||||||| || || || |||||||||||||| |||||||| || || Sbjct 7663 ACCACCACGCAGACGCAGCACAAGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTC-GC 7605 Query 33960 CAATTGT-CGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCG 34018 | || || | || |||| |||||||||||||| ||||||||||| || ||| | Sbjct 7604 TCAGGGTGCGACCATCCTCCAGCTGCTTGCCGGCAAAGATCAGGCGCTGTTGGTCCGGGG 7545 Query 34019 GCACGCTCTCTTTGTCC 34035 | | | ||| |||||| Sbjct 7544 GGATACCCTCCTTGTCC 7528 >seq39 Length=95809 Score = 91.5 bits (100), Expect = 1e-13 Identities = 96/124 (77%), Gaps = 2/124 (2%) Strand=Plus/Minus Query 33913 CGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCCAATTGT-CGCTC 33971 ||||| || || || | |||||||||||||| || ||||| || || | || ||| | Sbjct 16746 CGCAGGACGAGGTGCAATGTGCTCTCCTTCTGGATATTGTAGTC-GCTCAGAGTACGCCC 16688 Query 33972 GTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGCACGCTCTCTTT 34031 ||| |||| |||||||| ||||| |||||||||||||| ||| ||| | || ||| || Sbjct 16687 GTCCTCCAGCTGCTTGCCCGCAAAGATCAGGCGCTGCTGGTCCGGCGGAATGCCCTCCTT 16628 Query 34032 GTCC 34035 |||| Sbjct 16627 GTCC 16624 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397061862849022