Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20dermatis_20[genbank_20GCA_5F001264665.1_202015-08-11] 111 sequences; 7,540,864 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq14 118 3e-21 seq109 116 9e-21 seq75 86.0 1e-11 >seq14 Length=35264 Score = 118 bits (130), Expect = 3e-21 Identities = 154/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 288261 AAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTC 288320 ||| ||||| || | ||||| || || || || || |||||| || ||||| || || Sbjct 11901 AAGCACGAGGTGCAGGGTGCTCTCCTTCTGAATGTTGTAGTCGCTCAGGGTGCGGCCATC 11960 Query 288321 TTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATC 288380 || | || || || |||||||||||||||||||| || || || || || || Sbjct 11961 CTCGAGCTGCTTACCAGCGAAGATCAGACGCTGTTGGTCCGGAGGAATGCCCTCCTTGTC 12020 Query 288381 CTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGT 288440 |||||| || || || || || || || | || || || || || || |||||||| Sbjct 12021 CTGGATCTTGGCCTTGACATTGTCGATCGTGTCCGAAGACTCGACCTCAAGGGTGATCGT 12080 Query 288441 CTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||| || ||||||||||||||||| || ||||| Sbjct 12081 CTTGCCAGTCAGAGTCTTGACGAAGATTTGCAT 12113 >seq109 Length=10333 Score = 116 bits (128), Expect = 9e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | || || || || | ||||| || || ||||| || |||||| Sbjct 7662 CCACCACGCAGACGCAGCACAAGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTC 7603 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| || || || | || || || || |||||||| |||||||| ||| Sbjct 7602 AGGGTGCGACCATCCTCCAGCTGCTTGCCGGCAAAGATCAGGCGCTGTTGGTCCGGGGGG 7543 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || |||||||| || || || || || || || | ||| || || || Sbjct 7542 ATACCCTCCTTGTCCTGGATCTTGGCCTTGACATTCTCGATCGTGTCGGAAGACTCCACC 7483 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || ||||||||||||||||| || ||||||||||| | ||||| Sbjct 7482 TCAAGGGTGATCGTCTTCCCGGTAAGGGTCTTGACGAAGACTTGCAT 7436 >seq75 Length=190775 Score = 86.0 bits (94), Expect = 1e-11 Identities = 235/352 (67%), Gaps = 10/352 (3%) Strand=Plus/Plus Query 326029 GAAAAAGTTCATGACGAGACCAGAAATGTGAGTTCCGTCAACATCCGCGTCGGTCATGAT 326088 || |||||| |||| || || ||||| | || |||| ||| |||||||||||| Sbjct 183332 GAGAAAGTTGATGATCAGGCCCTTGATGTGCGAGCCATCAAAGTCCTGGTCGGTCATGAT 183391 Query 326089 CATCACATGACCGTAACGAAG--CGAGGACG-TGTCTTTGTACACTTTACCGGTTTGAAG 326145 ||||| ||||| || || | ||| |||| || || || ||| || || Sbjct 183392 CATCAGGCTGCCGTAGCGCAGGCCATCAACGCTGTC---ATAGACCTTGCCGTGCTGCAG 183448 Query 326146 GCCGAGAATTTGTTTGA-GCGCTGTGATTTCTTCGTTCTTCGTGATGCTTGCCACG-GAT 326203 |||||||| | |||| | ||| |||| || |||||||| |||| || | | | || Sbjct 183449 CCCGAGAATCTCCTTGATGTGCT-TGATCTCGGCGTTCTTCATGAT-CTGGTCGTGCGAC 183506 Query 326204 GCATCGCGGACGTTCAATAGTTTTCCACGAAGAGGGAACACTCCATATCTCTCGCGACCG 326263 || ||||| || || | | || || || || |||||||| || || |||||||| Sbjct 183507 GCCTCGCGCACATTGAGCAACTTACCGCGCAGCGGGAACACGCCGTACGCATCGCGACCC 183566 Query 326264 ACCACGGACAGCCCTGCGATTGCAAGTGTCGCTGCGGAATCCCCCTCCGTCAGAATGAGA 326323 ||| || | || | | ||||| | | || || || |||||||| || ||||| Sbjct 183567 ACCTCGCTGATGCCCGATACGGCAAGCGCCTTGGCCGAGTCACCCTCCGTGAGGATGAGC 183626 Query 326324 GTGCACATTTTGCTGTTATTCGTTCCAGCCCATGTAGCATCGTTGAGTTTGG 326375 ||||| |||| ||||| || ||||| ||||||| | ||| |||| Sbjct 183627 GTGCATTCGGCGCTGCGCTTCGTGCCCGCCCAATTAGCATCCTCGAGCTTGG 183678 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179652722310258