Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20dermatis_20[genbank_20GCA_5F001264665.1_202015-08-11] 111 sequences; 7,540,864 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq4 145 2e-29 seq111 91.5 4e-13 seq73 91.5 4e-13 >seq4 Length=115933 Score = 145 bits (160), Expect = 2e-29 Identities = 266/387 (69%), Gaps = 2/387 (1%) Strand=Plus/Minus Query 302491 TCAATTCCGTCATCGCCGTAGGAATACTGAATGATTTTGTTCTTGTTATTTCTTACGGTC 302550 ||||| || || || ||||| | | ||| ||| | ||||| | || | |||||| Sbjct 113496 TCAATACCATCTTCACCGTACGCAAACTCAATTACGTTGTTGGTAGAGTTGCGTACGGTA 113437 Query 302551 ATATCATAACCAATCATAATGTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCA 302610 ||||| | ||| | | ||| |||| ||| | ||||||||||||||| |||||| Sbjct 113436 CCGTCATAGCAAATAGTTACGTCCTCCAGGGCCTTCACTAAACGACGCTGAATGTAACCA 113377 Query 302611 GTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAG 302670 ||| | ||||| |||||||| ||||| ||||| |||||||| |||| || |||||| Sbjct 113376 GTTTCGGCCGTTTTCACAGCTGTGTCAATCAGACCCTCACGACCAGCCATGGCGTGGAAG 113317 Query 302671 AATAGCTCTTCCG-GTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTC 302729 || | || | || | | ||| | ||| | | || ||||||| || ||||| || Sbjct 113316 AAGAATTCGTGCGCGGTGAGGCCTCGCAA-ATACGAATTCTCAACAAAGCCACGGCTTTC 113258 Query 302730 GGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGAT 302789 |||| | |||| |||||| || || ||||| ||| || |||| | ||||| Sbjct 113257 AGGCGTAAAGTCGTCCTTGGTGAAATGCGGCAGACTCCGGTGACGGAAGCCAAAAGGGAT 113198 Query 302790 ACGCTTTCCATCAACGTTCTGCTGTCCCAGGCACGAAATCATCTGCGAAATATTTAAATC 302849 |||||| || || || |||||| || | || | | ||| || |||||||| | Sbjct 113197 ACGCTTGCCTTCCACCGACTGCTGACCGACACAAGCAGACATTTGTGAAATATTGATGAA 113138 Query 302850 ACTGCCCTTGGAGCCAGCATTTACCAT 302876 | ||||| || |||||| ||||||| Sbjct 113137 AGAACCCTTCGAACCAGCAATTACCAT 113111 >seq111 Length=407130 Score = 91.5 bits (100), Expect = 4e-13 Identities = 112/153 (73%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 251487 ACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCGAGC 251546 ||| || ||||||||||| || |||||||| ||||||||||| |||||||| || || Sbjct 50613 ACCATGCGAAATCATACAGTCGCGCTCCATCTCACCGAAACGCAGACCACCGTCACGGCT 50672 Query 251547 CCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGACCGATGGAGCGGCTATGTTG 251606 | |||||| | ||||| || ||||| | || ||||||| | ||| || || Sbjct 50673 ACGACCCTCAACCGGCTGCCGCGTGAGGATCTGCACAGGACCGCGCGCGCGACTGTGGAT 50732 Query 251607 CTTATCATTTACCATATGCTTGAGACGCTGGTA 251639 ||| || | ||||| || || || |||||||| Sbjct 50733 CTTGTCGTCCACCATGTGTTTTAGGCGCTGGTA 50765 >seq73 Length=43552 Score = 91.5 bits (100), Expect = 4e-13 Identities = 209/311 (67%), Gaps = 8/311 (3%) Strand=Plus/Plus Query 155587 CAATAGACGCCAGATTACATACCGCAGTCTCCTT-GTCGTCGCTGTATTCTACAATCTCA 155645 |||| || ||||| || || || || ||||| | | || |||||| || | |||||| Sbjct 36292 CAATTGATGCCAGGTTGCACACAGCCGTCTCGTCCGGCGA-GCTGTACTCGATAATCTCC 36350 Query 155646 CAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTGTTACAA 155705 ||||| ||| || |||||||| ||||| | ||||||||||| || | ||| Sbjct 36351 GTGCACAAGTTCGAGCTCTTGATCGTGCCCAGGTTCTTCTGGTTGCTCTTGCGGTTTGCC 36410 Query 155706 GCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAATCTTTAGC 155765 | |||||||| || ||| | ||| | || ||||| ||||| || || ||||| | Sbjct 36411 GAGTCCTTGTACAGGATGAAGGGGTTGCCCGTCTCGATCTGCGCCTCGAGAATGGCGTAC 36470 Query 155766 CAGAGGTCACGGGCATTAA---TTTGCTTGTTGTATCTGCCTTCCGACTCATATTTCATA 155822 || || | | || |||| ||||| | | ||| || ||| |||||| Sbjct 36471 CACAGCTTCTGCGCCTTAACAGAGCGCTTGGCG---CGGCCCTCGCGCTCGTATTTCTCG 36527 Query 155823 TACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGGCACTTATCGGGGCAA 155882 ||||| | | |||||||| || || || ||| || ||||||| | ||||||| Sbjct 36528 TACAGAGCATCAAACTCCTCACCATAGCAGTCGGCCAGGCCCGGGCACTCAGCGGGGCAC 36587 Query 155883 AACAGCGACCA 155893 | ||||||||| Sbjct 36588 ATCAGCGACCA 36598 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471815506799407