Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20dermatis_20[genbank_20GCA_5F001264665.1_202015-08-11] 111 sequences; 7,540,864 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq14 125 6e-24 seq109 113 4e-20 seq39 111 1e-19 >seq14 Length=35264 Score = 125 bits (138), Expect = 6e-24 Identities = 146/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 35540 GTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCC 35599 || |||||||| ||||||||||| ||| || ||| || | || || ||||||||||| Sbjct 11917 GTGCTCTCCTTCTGAATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTACCA 11976 Query 35600 GCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTC 35659 || || |||| ||||| ||||||| ||||| || |||||||||| |||||| ||| Sbjct 11977 GCGAAGATCAGACGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTG 12036 Query 35660 AGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTT 35719 | | | | | |||||| || || ||||| | |||||||| || || |||| ||| Sbjct 12037 ACATTGTCGATCGTGTCCGAAGACTCGACCTCAAGGGTGATCGTCTTGCCAGTCAGAGTC 12096 Query 35720 TTCACAAATATCTGCAT 35736 || || || || ||||| Sbjct 12097 TTGACGAAGATTTGCAT 12113 >seq109 Length=10333 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | || ||| | || | || |||||||| || |||||||| ||| | Sbjct 7662 CCACCACGCAGACGCAGCACAAGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTC 7603 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | ||| || | || ||||||||||| || ||||| |||| ||||| ||||||| || Sbjct 7602 AGGGTGCGACCATCCTCCAGCTGCTTGCCGGCAAAGATCAGGCGCTGTTGGTCCGGGGGG 7543 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | |||||||||| |||||| ||| | | | | | ||||||| || |||||| Sbjct 7542 ATACCCTCCTTGTCCTGGATCTTGGCCTTGACATTCTCGATCGTGTCGGAAGACTCCACC 7483 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || | |||||||| || || || | || || || || | ||||| Sbjct 7482 TCAAGGGTGATCGTCTTCCCGGTAAGGGTCTTGACGAAGACTTGCAT 7436 >seq39 Length=95809 Score = 111 bits (122), Expect = 1e-19 Identities = 179/255 (70%), Gaps = 28/255 (11%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 ||||| || || | || || | || || || |||||||| || || ||||| ||| | Sbjct 16758 CCACCGCGCAAACGCAGGACGAGGTGCAATGTGCTCTCCTTCTGGATATTGTAGTCGCTC 16699 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | || ||| |||| ||||||||||| |||||||| |||| ||||||||||||| ||| Sbjct 16698 AGAGTACGCCCGTCCTCCAGCTGCTTGCCCGCAAAGATCAGGCGCTGCTGGTCCGGCGGA 16639 Query 35630 ACGCTCTCCTTGTCCATGATCTT----TTG-CT-------TCAGAGTTGC------CACC 35671 | || |||||||||| |||||| ||| || | | || || ||| Sbjct 16638 ATGCCCTCCTTGTCCTGGATCTTGGTCTTGACTACCTCGGTTACCGTCGCTCCACGTACC 16579 Query 35672 GTG-TCGCTCGATTC--------CAC-CTCCACCGTGATCGTTTTACCCGTCAAAGTTTT 35721 || ||| |||| || ||| ||||| |||||||||||| || |||| || || Sbjct 16578 ATGCTCGATCGAGTCGCTGCTCTCACACTCCAGCGTGATCGTTTTGCCGGTCAGCGTCTT 16519 Query 35722 CACAAATATCTGCAT 35736 |||||||||||||| Sbjct 16518 AACAAATATCTGCAT 16504 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450792974523880