Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20dermatis_20[genbank_20GCA_5F001264665.1_202015-08-11] 111 sequences; 7,540,864 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq14 176 9e-39 seq109 172 1e-37 seq57 100 6e-16 seq39 100 6e-16 seq63 84.2 5e-11 >seq14 Length=35264 Score = 176 bits (194), Expect = 9e-39 Identities = 168/215 (78%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 282885 CGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCA 282944 ||||| || || || | ||||| || || || ||||||||||| || ||||||||| Sbjct 11899 CGAAGCACGAGGTGCAGGGTGCTCTCCTTCTGAATGTTGTAGTCGCTCAGGGTGCGGCCA 11958 Query 282945 TCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTG 283004 ||||| || || || || || ||||||| ||| |||||||| ||||| ||||||||| Sbjct 11959 TCCTCGAGCTGCTTACCAGCGAAGATCAGACGCTGTTGGTCCGGAGGAATGCCCTCCTTG 12018 Query 283005 TCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATC 283064 || |||||||| || || || | ||||| |||||||||| ||||| || || |||||| Sbjct 12019 TCCTGGATCTTGGCCTTGACATTGTCGATCGTGTCCGAAGACTCGACCTCAAGGGTGATC 12078 Query 283065 GTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| || |||| |||||| ||||| || ||||| Sbjct 12079 GTCTTGCCAGTCAGAGTCTTGACGAAGATTTGCAT 12113 >seq109 Length=10333 Score = 172 bits (190), Expect = 1e-37 Identities = 175/228 (77%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||||||||| || || || || || | ||||| || || |||||||||||||| Sbjct 7663 ACCACCACGCAGACGCAGCACAAGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCT 7604 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || ||||| |||||||| || || || ||||||||||||| || |||||||| || Sbjct 7603 CAGGGTGCGACCATCCTCCAGCTGCTTGCCGGCAAAGATCAGGCGCTGTTGGTCCGGGGG 7544 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 |||||||||||||| |||||||| || || || | ||||| ||||| |||| || || Sbjct 7543 GATACCCTCCTTGTCCTGGATCTTGGCCTTGACATTCTCGATCGTGTCGGAAGACTCCAC 7484 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || ||||||||||| || || | ||||| ||||| | ||||| Sbjct 7483 CTCAAGGGTGATCGTCTTCCCGGTAAGGGTCTTGACGAAGACTTGCAT 7436 >seq57 Length=56119 Score = 100 bits (110), Expect = 6e-16 Identities = 162/230 (70%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 316975 TCGGATCCGTCGAGGTCATGCTCAACATATGCAGTTTTCAGAATATCCT---TCGTCGGG 317031 || || ||||||||||| ||||| || || ||| | | | |||| || ||| Sbjct 15952 TCCGAGCCGTCGAGGTCGTGCTCGACGTA-CCAG--GTGCGCACCTCCTCGGGCGAGGGG 15896 Query 317032 AACCCTTCCAACTGACCGTTCACAATCGCCCTCATCAGTGTCGACTTGCCAGCACCATTG 317091 || || || | ||| || ||| || || | |||||| ||||||||||| | ||| || Sbjct 15895 AAGCCCTCGACCTGGCCATTCTGGATAGCGCGCATCAGGGTCGACTTGCCGGAACCGTTA 15836 Query 317092 GGGCCGCAAAGACCATACCGATTTCCCTTCTTCAGATTAAAACGGGTGTTGTTCAGAAGA 317151 | || || ||||| || || | || ||| ||| ||| || ||||||| ||| Sbjct 15835 CGACCACAGAGACCGTAGCGGTGGCCACGCTTGAGACGCAAAGTGGCAGTGTTCAGCAGA 15776 Query 317152 ATCTTACCACCATATGCCAGAGAGAACTCACAATCACACAGGTCCTCGCC 317201 ||||| |||| || ||||| ||||||| ||| | ||||||||||||||| Sbjct 15775 ATCTTGGCACCGTAGGCCAGCGAGAACTGACAGTTACACAGGTCCTCGCC 15726 >seq39 Length=95809 Score = 100 bits (110), Expect = 6e-16 Identities = 108/143 (76%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 ||||| |||| || || || || || || ||||| || || ||||| |||||||| Sbjct 16758 CCACCGCGCAAACGCAGGACGAGGTGCAATGTGCTCTCCTTCTGGATATTGTAGTCGCTC 16699 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || || || || ||||| || || || || |||||||||| || || ||||| |||| Sbjct 16698 AGAGTACGCCCGTCCTCCAGCTGCTTGCCCGCAAAGATCAGGCGCTGCTGGTCCGGCGGA 16639 Query 282993 ATACCCTCCTTGTCTTGGATCTT 283015 || ||||||||||| |||||||| Sbjct 16638 ATGCCCTCCTTGTCCTGGATCTT 16616 >seq63 Length=189369 Score = 84.2 bits (92), Expect = 5e-11 Identities = 58/66 (88%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 283035 GTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATC 283094 |||||||| | ||||| ||||||||||||||||||||||||| |||||||| || ||| Sbjct 2 GTGTCCGACGACTCGACCTCGAGAGTGATCGTCTTACCCGTCAGGGTCTTAACAAAGATC 61 Query 283095 TGCATT 283100 |||||| Sbjct 62 TGCATT 67 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046737711340594