Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20dermatis_20[genbank_20GCA_5F001264665.1_202015-08-11] 111 sequences; 7,540,864 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq14 154 1e-32 seq109 150 2e-31 seq39 122 8e-23 >seq14 Length=35264 Score = 154 bits (170), Expect = 1e-32 Identities = 163/213 (77%), Gaps = 4/213 (2%) Strand=Plus/Plus Query 41653 CACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTC 41712 ||| || ||||| |||||||||||||||||||| |||||| |||||||| | || || Sbjct 11904 CACGAGGTGCAGGGTGCTCTCCTTCTGAATGTTGTAGTCGCTCAGGGTGCGGCCATCCTC 11963 Query 41713 GAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCAT 41772 ||||||||| || ||||| ||||| ||||||||||||| |||| || |||||||||| Sbjct 11964 GAGCTGCTTACCAGCGAAGATCAGACGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTG 12023 Query 41773 GATTTTTTGCTT--CAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTT 41830 ||| || ||| || | || | ||||| ||||| ||||| | || ||||| Sbjct 12024 GATCTTGGCCTTGACATTGTCG--ATCGTGTCCGAAGACTCGACCTCAAGGGTGATCGTC 12081 Query 41831 TTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 || || ||||| ||||| ||||| || |||||| Sbjct 12082 TTGCCAGTCAGAGTCTTGACGAAGATTTGCATG 12114 >seq109 Length=10333 Score = 150 bits (166), Expect = 2e-31 Identities = 170/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | ||| || || || |||||||||||||| ||||| |||||| Sbjct 7662 CCACCACGCAGACGCAGCACAAGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTC 7603 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||||| | || || |||||||||||||| || ||||||||||||||||||| ||| Sbjct 7602 AGGGTGCGACCATCCTCCAGCTGCTTGCCGGCAAAGATCAGGCGCTGTTGGTCCGGGGGG 7543 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACC 41815 | | |||||||||| ||| || ||| | | | |||||| ||||||||| Sbjct 7542 ATACCCTCCTTGTCCTGGATCTTGGCCTTGACATTCTCGATCGTGTCGGAAGACTCCACC 7483 Query 41816 TCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 || | || ||||| || || || || ||||| ||||| | |||||| Sbjct 7482 TCAAGGGTGATCGTCTTCCCGGTAAGGGTCTTGACGAAGACTTGCATG 7435 >seq39 Length=95809 Score = 122 bits (134), Expect = 8e-23 Identities = 184/258 (71%), Gaps = 28/258 (11%) Strand=Plus/Minus Query 41634 CGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGG 41693 |||| ||||| | ||| | || || |||| |||||||||||||| || || |||||| Sbjct 16760 CGCCACCGCGCAAACGCAGGACGAGGTGCAATGTGCTCTCCTTCTGGATATTGTAGTCGC 16701 Query 41694 AGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGG 41753 || || ||| |||| || ||||||||||| || || ||||||||||| ||||||| | Sbjct 16700 TCAGAGTACGCCCGTCCTCCAGCTGCTTGCCCGCAAAGATCAGGCGCTGCTGGTCCGGCG 16641 Query 41754 GAACGCTCTCCTTGTCCATGATTTT----TTG-CT-------TCAACGACG----AC--A 41795 ||| || |||||||||| ||| || ||| || | | || || || | Sbjct 16640 GAATGCCCTCCTTGTCCTGGATCTTGGTCTTGACTACCTCGGTTACCGTCGCTCCACGTA 16581 Query 41796 CAGTG-TCGCTCGACTC--------CAC-CTCCACCGTTATCGTTTTACCCGTCAGCGTC 41845 | || ||| |||| || ||| ||||| ||| |||||||| || ||||||||| Sbjct 16580 CCATGCTCGATCGAGTCGCTGCTCTCACACTCCAGCGTGATCGTTTTGCCGGTCAGCGTC 16521 Query 41846 TTTACGAAAATCTGCATG 41863 || || || ||||||||| Sbjct 16520 TTAACAAATATCTGCATG 16503 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462303358553200