Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20dermatis_20[genbank_20GCA_5F001600775.1_202016-03-01] 18 sequences; 7,551,239 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq8 145 8e-30 >seq8 Length=411764 Score = 145 bits (160), Expect = 8e-30 Identities = 460/705 (65%), Gaps = 20/705 (3%) Strand=Plus/Minus Query 16679 TAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCTCCATG 16738 || ||| |||||| || |||||||| | ||||||| || || || |||||||| Sbjct 49617 TAGTCGGCAACGCGGCGCTCAAAAAAGTTTGACTTGCCCTGGAGCGAAATGTTCTCCATA 49558 Query 16739 AAATCAAAAGGATTAGT--AGCTGAAAATATT--TTAGAGTACCCCAGTTCGGCGATTAA 16794 || ||||| || || | || || || | || |||| || || | | | | | Sbjct 49557 AAGTCAAAGGGGTTCGCCGAGTTG----TAGTGCTTGGAGTTGCCGAGGTTGACAAGCAG 49502 Query 16795 TCTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTATAAGACG 16854 | ||||| ||||| || || || |||||||| | | |||||| || || || Sbjct 49501 GCGGTCCGCCACAAACTCAATGTACTGGCACATGAGGCGGGCGTTCATGCCGATCAGCGA 49442 Query 16855 TACCGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAATACT 16914 || || || || || |||||||| ||||| ||| | || || || | ||||| | Sbjct 49441 GACAGGCAGGGCGTCGGTCAAAAAGTCCTGCTCAATAGCCACGGCCTCAGTGATAATGCG 49382 Query 16915 AGCAACTCGTTCCTCGGACGGTGTATGT-----TTAAGATGTTTAAACATCAGACATGCG 16969 || ||| |||| |||| | || || || | |||| || || || Sbjct 49381 GTTCAC-CGTG--TCGG--GGTGCGCGCGCTTCTTCAGGTGGCTGAACAAGAGGCACGCA 49327 Query 16970 AAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGC 17029 || || || | |||||||| | ||| || ||||| || || | || |||||| Sbjct 49326 AAGTCTGTGTGCAGGCCCTCGTCACGCGAGATGAGCTCGTTCGAGAACGACAGGCCGGGC 49267 Query 17030 ATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCC 17089 || || |||||||| | |||||| || | ||||||||| || || || || |||||| Sbjct 49266 ATGAGGCCACGTTTCTTGAGCCAAAAGATGGAGGCGAACGAGCCCGAGAAAAAGATACCC 49207 Query 17090 TCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGA-ATCCA 17148 ||||| | ||||| |||| | || || | | ||| ||| ||| | ||| ||||| Sbjct 49206 TCGACAGCGGCAAAAGCGACCAGGCGCTCCGAGAACGAGGCGCGCTTG-TCCGAGATCCA 49148 Query 17149 TTTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAATAA 17208 | | |||||||||| |||||||| | | | || || || ||||| ||||| | Sbjct 49147 GCGCAGGGCCCACTCGGCCTTTTGCTTGACGACAGGGATAGTCTCGATGGCATTAAAGAG 49088 Query 17209 TTTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGGA 17268 ||| | || | ||| || ||||| |||||||| || |||| | || || Sbjct 49087 GAACTCGCGCTGCTCCGGCTCGCGGATGTACGTGTCGATGAGGAGTGAGTACGTCTCCGA 49028 Query 17269 GTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAAC 17328 ||| ||||||||||| ||||| || ||||| || || ||||| || || || || Sbjct 49027 GTGGATGTTCTCCATCATAATCTGGAAGCCGTAGAAACAGCGGGCCTCGGCCGCCTGCAC 48968 Query 17329 TTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTC 17373 || || ||| || || | || || ||||| || ||||| || Sbjct 48967 CTCGGCGCTGAAGCGCTCTACCAGGTTCTCGTTAACAATGCCATC 48923 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517545483552240