Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20dermatis_20[genbank_20GCA_5F001600775.1_202016-03-01] 18 sequences; 7,551,239 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq8 125 8e-24 >seq8 Length=411764 Score = 125 bits (138), Expect = 8e-24 Identities = 452/701 (64%), Gaps = 6/701 (1%) Strand=Plus/Plus Query 53951 TCAAACTCGTCTCCCCAAA-CATT-GTCCAATCCAGGACATTCATCCGGACACATCAACG 54008 |||||||| ||| ||| | || | | ||| || || || ||| | || ||||||| || Sbjct 36933 TCAAACTC--CTCACCATAGCAGTCGGCCAGGCCCGGGCACTCAGCGGGGCACATCAGCG 36990 Query 54009 ACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAA 54068 |||| || |||| | || || || ||| || | || |||| ||| || || | | Sbjct 36991 ACCAGTCGCCGTTCTGCTCAACGCGGCGCATGAACAAGTCGGGAACCCACAGCGCCAGGA 37050 Query 54069 ATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCA 54128 | || || | | | ||||| || || ||||| ||||| | |||| | | Sbjct 37051 ACAGGTCGCGCGCACGCACCTCCTCCTTACCATGGTTCTTGCGCAGATCAATGAACTCAA 37110 Query 54129 TAATATCAGAATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTC 54188 | || || ||||| || |||| ||| || | | | || || || ||||| || | Sbjct 37111 ACACGTCCGAGTGCCATGGCTCCAGGTAAATCGCAAAGGCGCCGGGGCGCTTGTTGCCAC 37170 Query 54189 CCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGG 54248 |||| || | ||| | || ||||| || || || | | ||| || | |||||| ||| Sbjct 37171 CCTGGTCCACGTAGCGCGCTGTGTTGTTGTACACGCGAAGCATGGGCACAATACCGTTGC 37230 Query 54249 ATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGAC 54308 |||| || || |||| || || || | || || || || || || | Sbjct 37231 TCACACCGTTCGTACCGGCAATGTACGAGCCCGTCGCGCGGATGTTGTGGATGTTCAGGC 37290 Query 54309 CTATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAA-CGTATCATAGATGCCC 54367 | || || || ||| | || ||| | || || ||| |||| ||| ||||| || ||| Sbjct 37291 CAATACCACCGGCCGTCTTGCTGATCATCGCACA-CGTCTTAAGCGTGTCATAAATACCC 37349 Query 54368 TCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTT 54427 || || || ||| ||||| | | || || ||| ||||||||| | || Sbjct 37350 TCAATCGAGTCGTCCTTCATGCTCACAAGGAAGCAGGACGACATTTGGGGGTTGGGCGTG 37409 Query 54428 CCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTAC 54487 || ||||| || | ||| || || ||||||||||| || || || | | |||||| Sbjct 37410 CCAGCATTGAACAGGGTCGGCGACGCGTGCGTAAAGGCCTTCTCGGACATGAAGTTGTAC 37469 Query 54488 GTCTCGATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATG 54547 |||||||| || | | |||| || || || | ||||||||||| | |||| Sbjct 37470 GTCTCGATCGCGCTCTTCACATCCTCGCCGTGGATGCCCATAGCGACACGCATAAGCATG 37529 Query 54548 TGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAGCAAGTAGGATTTTTCCAAAGTT 54607 ||||| || | || ||| |||| ||| || |||| |||||| |||| || Sbjct 37530 TGCTGGGGGCGCTCCGCGACCTTGCCGTTGATCCGTAGCAGGTAGGAACGCTCCAGCGTC 37589 Query 54608 TTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAAT 54648 || || ||||| ||||||| |||||| || ||||| || Sbjct 37590 TTGAAGCCAAAGAAGTTGTAGTGAAAGTCGCGCTCGTAGAT 37630 Score = 89.7 bits (98), Expect = 6e-13 Identities = 161/232 (69%), Gaps = 5/232 (2%) Strand=Plus/Minus Query 24149 GTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCC 24208 ||| || |||||||| | || | ||||| || |||| || |||||||| ||||| Sbjct 49318 GTGCAGGCCCTCGTCACGCGAGATGAGCTCGTTCGAGAACGACAGGCCGGGCATGAGGCC 49259 Query 24209 ACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGC 24268 ||| || || |||||||| ||||| || || || || || || || || || || || || Sbjct 49258 ACGTTTCTTGAGCCAAAAGATGGAGGCGAACGAGCCCGAGAAAAAGATACCCTCGACAGC 49199 Query 24269 CGCAAAGGCAATAAGTCTTTCTCCATAACC-GGCGC---TGTCATGTATCCACTTTTGAG 24324 ||||| || | || | || | | ||| ||||| |||| ||||| | | Sbjct 49198 GGCAAAAGCGACCAGGCGCTC-CGAGAACGAGGCGCGCTTGTCCGAGATCCAGCGCAGGG 49140 Query 24325 CCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAG 24376 |||| |||||||| | || || ||| || ||||| || ||||||||||| Sbjct 49139 CCCACTCGGCCTTTTGCTTGACGACAGGGATAGTCTCGATGGCATTAAAGAG 49088 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593721466412640