Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20dermatis_20[genbank_20GCA_5F001600775.1_202016-03-01] 18 sequences; 7,551,239 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq8 482 2e-131 seq6 131 2e-25 seq4 127 2e-24 >seq8 Length=411764 Score = 482 bits (534), Expect = 2e-131 Identities = 624/852 (73%), Gaps = 15/852 (2%) Strand=Plus/Plus Query 116576 GAGCCGCTGCTGCGCGAGAACCCCCGCCGGTTCGTGATTTTCCCCATACAATACCCGGAC 116635 |||||||||||| || ||| || |||||| | ||||| || | |||| || Sbjct 48716 GAGCCGCTGCTGAAGGAAAACAAGTCGCGTTTCGTGCTCTTCCCGATCCGCTACCACGAG 48775 Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||||| ||||||||||||||||||||||| | ||||||| |||||||| Sbjct 48776 ATTTGGCAGATGTACAAGAAGGCCGAGGCGTCGTTCTGGACTGCCGAGGAGATGGACCTG 48835 Query 116696 TCCAAGGACACGAGCGACTGGGAGC---GCTTGAACGACAACGAGCGCCATTTCATCAAG 116752 || |||||| | ||||||||| | || ||||||||||||||||||| || | | Sbjct 48836 TCGAAGGACCTGCACGACTGGGACCACCGCATGAACGACAACGAGCGCCACTTTGTTAGC 48895 Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812 ||||| |||||||| || || || || ||||| || |||||||| ||||| ||||| Sbjct 48896 CACGTCCTGGCCTTCTTTGCTGCATCGGATGGCATTGTTAACGAGAACCTGGTAGAGCGC 48955 Query 116813 TTC-GCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCAT 116871 ||| || | | ||||||||| ||||||||| || || ||||||||||| ||||| || Sbjct 48956 TTCAGCGCCG-AGGTGCAGGCGGCCGAGGCCCGCTGTTTCTACGGCTTCCAGATTATGAT 49014 Query 116872 GGAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGTGCGCTCTTCGGA 116931 ||||||| | |||||||| | ||| || |||||||||||||||| | ||| |||| Sbjct 49015 GGAGAACATCCACTCGGAGACGTACTCACTCCTCATCGACACGTACATCCGCGAGCCGGA 49074 Query 116932 GGAGA---AGCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGC 116988 | || || ||| | || || ||||||||||| || || |||||| | ||||| Sbjct 49075 GCAGCGCGAGTTCC---TCTTTAATGCCATCGAGACTATCCCTGTCGTCAAGCAAAAGGC 49131 Query 116989 CGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAG-GCCGCCTTCGGCGAGCGCCTGGTGG 117047 ||||||||| |||||||||||| | | || || | ||| | ||| ||||||||||| | Sbjct 49132 CGAGTGGGCCCTGCGCTGGATCTCGGACA-AGCGCGCCTCGTTCTCGGAGCGCCTGGTCG 49190 Query 117048 CCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCA 117107 | || || || |||||||| |||| || |||||| |||||| |||| |||||||||| Sbjct 49191 CTTTTGCCGCTGTCGAGGGTATCTTTTTCTCGGGCTCGTTCGCCTCCATCTTTTGGCTCA 49250 Query 117108 AGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGG 117167 ||||||| |||||||||||||||||| | ||| |||||||||||||| | ||||||| Sbjct 49251 AGAAACGTGGCCTCATGCCCGGCCTGTCGTTCTCGAACGAGCTCATCTCGCGTGACGAGG 49310 Query 117168 GTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCG-AGCGCG 117226 | ||||| |||||||| || | |||||| || || | |||| || | | || Sbjct 49311 GCCTGCACACAGACTTTGCGTGCCTCTTGTTCAGCCACCTGAAGAAGCGCGCGCACCCCG 49370 Query 117227 GCGCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCACCGAA 117286 | || || | || |||| || || || || || |||||| ||| | ||||| Sbjct 49371 ACACG-GTGAACCGCATTATCACTGAGGCCGTGGCTATTGAGCAGGACTTTTTGACCGAC 49429 Query 117287 GCGCTGCCGGTGCGTCTGCTGGGACTCAATTGCGAAACGATGTCGCAATACATCGAGTTC 117346 || ||||| || ||| | || | || | |||| || ||||| ||||| Sbjct 49430 GCCCTGCCTGTCTCGCTGATCGGCATGAACGCCCGCCTCATGTGCCAGTACATTGAGTTT 49489 Query 117347 GTCGCCGACAGGCTGCTGCTCGAGCTGGTCGGCGCCAAGCACTACAACACGCCCAACCCG 117406 || || ||| | ||||| || | || | | | |||||||||||||| || | ||||| Sbjct 49490 GTGGCGGACCGCCTGCTTGTCAACCTCGGCAACTCCAAGCACTACAACTCGGCGAACCCC 49549 Query 117407 CTGGACTTTATG 117418 | ||||||||| Sbjct 49550 TTTGACTTTATG 49561 >seq6 Length=598762 Score = 131 bits (144), Expect = 2e-25 Identities = 158/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||| | ||||| || || || || || || || |||||| | || || || | || Sbjct 366841 ATGCAAGTCTTCGTCAAGACCCTTACCGGGAAGACGATCACCCTTGAGGTGGAGTCTTCC 366900 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | |||||| || || | ||||| ||||| |||||| ||||||| Sbjct 366901 GACACGATCGAGAATGTCAAGGCCAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAA 366960 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || || |||| || ||||| |||||||| || | |||||||| | |||||||||| Sbjct 366961 CAGCGCCTGATCTTTGCCGGCAAGCAGCTGGAGGATGGTCGCACCCTGAGCGACTACAAC 367020 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 |||||||||||| ||| || || || ||| |||| Sbjct 367021 ATCCAGAAGGAGAGCACTCTCCACCTTGTGCTGCG 367055 Score = 114 bits (126), Expect = 1e-20 Identities = 107/136 (79%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 40783 GACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGAC 40842 ||||| |||||||| || |||||||||| || || |||| |||||||| |||||||| Sbjct 457224 GACAAGGAGGGCATTCCGCCGGACCAGCAGCGCCTGATCTTTGCGGGCAAGCAGCTGGAG 457165 Query 40843 GACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTG 40902 |||| ||| || || | ||||||||| |||||||||||| ||| |||| || || || Sbjct 457164 GACGGGCGTACTCTGAGCGACTACAATATCCAGAAGGAGAGCACATTGCACCTCGTCCTG 457105 Query 40903 CGCTTGAGGGGCGGCG 40918 || ||| | || |||| Sbjct 457104 CGTTTGCGCGGTGGCG 457089 >seq4 Length=1186009 Score = 127 bits (140), Expect = 2e-24 Identities = 154/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| || || || || ||||| || |||||| | || ||||| | | Sbjct 398029 ATGCAAATCTTCGTCAAGACTCTGACTGGCAAGACGATCACCCTTGAGGTCGAGTCTTCG 398088 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | |||||| || || | ||||| |||||||| || ||||||| Sbjct 398089 GACACGATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCAA 398148 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || || |||| ||| || || ||||| || || | |||||||| | |||||||||| Sbjct 398149 CAGCGTCTGATCTTCGCTGGTAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTACAAC 398208 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899 || ||||||||| ||| ||||| || ||| Sbjct 398209 ATTCAGAAGGAGAGCACCCTGCACCTCGTG 398238 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515219084075680