Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20dermatis_20[genbank_20GCA_5F001600775.1_202016-03-01] 18 sequences; 7,551,239 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq4 145 7e-30 seq8 100 2e-16 seq6 93.3 4e-14 >seq4 Length=1186009 Score = 145 bits (160), Expect = 7e-30 Identities = 149/195 (76%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 118547 CTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTA 118606 ||| || ||||||||||| ||||||| ||||| |||||||||||| || |||||| | Sbjct 398220 CTCCTTCTGAATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTACCAGCGAA 398161 Query 118607 GATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTG 118666 ||| |||||||| || || ||||| |||||||||||||| || || || || | Sbjct 398160 GATCAGACGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATT 398101 Query 118667 TTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 118726 |||| ||||||| ||||||||| | ||| | ||| ||||| |||||||| || || Sbjct 398100 GTCGATCGTGTCCGAAGACTCGACCTCAAGGGTGATCGTCTTGCCAGTCAGAGTCTTGAC 398041 Query 118727 AAAAATCTGCATGGC 118741 || || |||||||| Sbjct 398040 GAAGATTTGCATGGC 398026 >seq8 Length=411764 Score = 100 bits (110), Expect = 2e-16 Identities = 240/360 (67%), Gaps = 11/360 (3%) Strand=Plus/Plus Query 44942 ATGCCCGGACTGACGTTTAGCAACGAATTGATTTCGAGAGACGAAGGTCTGCACACCAAC 45001 |||||||| ||| |||| ||||| | || ||| | ||||| || |||||||| || Sbjct 49265 ATGCCCGGCCTGTCGTTCTCGAACGAGCTCATCTCGCGTGACGAGGGCCTGCACACAGAC 49324 Query 45002 TTTGCCTGCCTCTACTATAATACGAGAGTCGATCAAAAGTTGGACGCGCCC----ACCGT 45057 ||||| ||||||| | | | | || | ||| | ||| ||| || || Sbjct 49325 TTTGCGTGCCTCTTGTTCA----GCCACCTGA--AGAAGCGCG-CGCACCCCGACACGGT 49377 Query 45058 CAACGACATGTTCTCCGAAGCCGTGGCCATCGAGATGGAATTTTTTGCTGAGGCTCTGCC 45117 ||| ||| || | || |||||||| || ||| ||| ||||| | || || ||||| Sbjct 49378 GAACCGCATTATCACTGAGGCCGTGGCTATTGAGCAGGACTTTTTGACCGACGCCCTGCC 49437 Query 45118 CGAATCGTTGGTGGGAATGAACGCGAATATGATGAGAAAGTACATTGAGTTTGTCGCCGA 45177 | ||| || | || |||||||| | ||| | |||||||||||||||| || || Sbjct 49438 TGTCTCGCTGATCGGCATGAACGCCCGCCTCATGTGCCAGTACATTGAGTTTGTGGCGGA 49497 Query 45178 TCGTCTTCTCGTCCAGTTAAAGTATCCCAAGATGTACTATACTGAGAACCCATTCGAGTT 45237 || || || ||| | | | ||||| ||| | | | |||||| || || || Sbjct 49498 CCGCCTGCTTGTCAACCTCGGCAACTCCAAGCACTACAACTCGGCGAACCCCTTTGACTT 49557 Query 45238 TATGAACAATATTTCGTTGGAGGGCAAAACTAAtttttttGAGAAACGCGTCGGCGAATA 45297 |||| | || |||||| | ||||||| | || ||||||||| ||||| | ||| || Sbjct 49558 TATGGAGAACATTTCGCTCCAGGGCAAGTCAAACTTTTTTGAGCGCCGCGTTGCCGACTA 49617 Score = 96.9 bits (106), Expect = 3e-15 Identities = 136/189 (72%), Gaps = 4/189 (2%) Strand=Plus/Plus Query 134438 GTCGTCCTTGATGCTTTGCAGGAAACACGAACACATTTGTTGACGACGCGTACCCGCCGA 134497 ||||||||| ||||| ||||| || || ||||||| | |||| || || Sbjct 37358 GTCGTCCTTCATGCTCACAAGGAAGCAGGACGACATTTGGGGGTTGGGCGTGCCAGCATT 37417 Query 134498 AAACAGAGTCGGGCTCGCGTGCGTAAAGG--TGCCCAGACTCATCAACTGATATGTTTCA 134555 ||||| ||||| |||||||||||||| | | | || ||| || | || || || Sbjct 37418 GAACAGGGTCGGCGACGCGTGCGTAAAGGCCTTCTCGGA--CATGAAGTTGTACGTCTCG 37475 Query 134556 ATGACGCTCTTAACGTCGTCGCCGTGAATGGCCAGAGCGACGCGCATGAGCATGTGTTGG 134615 || ||||||| || || |||||||| ||| ||| |||||| ||||| |||||||| ||| Sbjct 37476 ATCGCGCTCTTCACATCCTCGCCGTGGATGCCCATAGCGACACGCATAAGCATGTGCTGG 37535 Query 134616 GGTCTCTCC 134624 || | |||| Sbjct 37536 GGGCGCTCC 37544 >seq6 Length=598762 Score = 93.3 bits (102), Expect = 4e-14 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 118526 CAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATC 118585 || ||| | ||||| || ||| || || |||||||| ||||||| ||||| ||| Sbjct 367053 CAGCACAAGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGACCATC 366994 Query 118586 CTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645 ||| ||||| || || || |||| || ||||| || || || || || ||||||||||| Sbjct 366993 CTCCAGCTGCTTGCCGGCAAAGATCAGGCGCTGTTGGTCCGGGGGGATACCCTCCTTGTC 366934 Query 118646 TGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGT 118705 || || || || | |||| ||||| | ||| ||||| | ||| | ||| Sbjct 366933 CTGGATCTTGGCCTTGACATTCTCGATCGTGTCGGAAGACTCCACCTCAAGGGTGATCGT 366874 Query 118706 TTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGC 118741 || ||||| || || || || || | |||||||| Sbjct 366873 CTTCCCGGTAAGGGTCTTGACGAAGACTTGCATGGC 366838 Score = 84.2 bits (92), Expect = 2e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571 || ||||| || | || || | ||| | ||| ||| || || || ||||| |||||| Sbjct 457091 CCACCGCGCAAACGCAGGACGAGGTGCAATGTGCTCTCCTTCTGGATATTGTAGTCGCTC 457150 Query 118572 ATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGT 118631 | ||| ||| ||||| ||||| || || || |||| || |||||||| || || || Sbjct 457151 AGAGTACGCCCGTCCTCCAGCTGCTTGCCCGCAAAGATCAGGCGCTGCTGGTCCGGCGGA 457210 Query 118632 ATGCCCTCCTTGTC 118645 |||||||||||||| Sbjct 457211 ATGCCCTCCTTGTC 457224 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433830304828456