Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20dermatis_20[genbank_20GCA_5F001600775.1_202016-03-01] 18 sequences; 7,551,239 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq8 120 4e-22 >seq8 Length=411764 Score = 120 bits (132), Expect = 4e-22 Identities = 369/566 (65%), Gaps = 10/566 (2%) Strand=Plus/Minus Query 33596 GTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCATTAGGCC 33655 |||||| |||||||| | || | ||||| || |||| || |||||||| ||||| Sbjct 49318 GTGCAGGCCCTCGTCACGCGAGATGAGCTCGTTCGAGAACGACAGGCCGGGCATGAGGCC 49259 Query 33656 ACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTTCTACTGC 33715 ||| || || |||||||| ||||| ||||| || || || || ||||| || || || || Sbjct 49258 ACGTTTCTTGAGCCAAAAGATGGAGGCGAACGAGCCCGAGAAAAAGATACCCTCGACAGC 49199 Query 33716 AGCAAAGGCAATAAGTCTCTCTCCATAACC-GGCGC---TGTCATGTATCCACTTTTGAG 33771 ||||| || | || | ||| | | ||| ||||| |||| ||||| | | Sbjct 49198 GGCAAAAGCGACCAGGCGCTC-CGAGAACGAGGCGCGCTTGTCCGAGATCCAGCGCAGGG 49140 Query 33772 CCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGtttt 33831 |||| |||||||| | || || ||| || || || |||||||||||||| | | Sbjct 49139 CCCACTCGGCCTTTTGCTTGACGACAGGGATAGTCTCGATGGCATTAAAGAGGAACTCGC 49080 Query 33832 tttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGT 33891 | | || | || || ||||| | || ||| | ||||| || |||| Sbjct 49079 GCTGCTCCGGCTCGCGGATGTACGTGTCGATGAGGAGTGAGTACGTCTCCGAGTGGATGT 49020 Query 33892 TTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCTGTAC 33951 | || || ||||| || ||||||||||| | ||||||| |||||| || | | Sbjct 49019 TCTCCATCATAATCTGGAAGCCGTAGAAACAGCGGGCCTCGGCCGCCTGCACCTCGGCGC 48960 Query 33952 AAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCACTGGCTGCAAAAAACGCCAATA 34011 || || ||| | | || || || || || ||||| || ||||| || |||| | Sbjct 48959 TGAAGCGCTCTACCAGGTTCTCGTTAACAATGCCATCCGATGCAGCAAAGAAGGCCAGGA 48900 Query 34012 CATGTTTTATAAAATATTTTTCGTCTGGTGTT----AGTTTATTCCAATCATTGATATCT 34067 | || | | ||| | |||| || ||| | | | ||| || | | || Sbjct 48899 CGTGGCTAACAAAGTGGCGCTCGT-TGTCGTTCATGCGGTGGTCCCAGTCGTGCAGGTCC 48841 Query 34068 TTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTC 34127 || || | |||| || || | ||||| || || ||||| ||||| || ||||| | | Sbjct 48840 TTCGACAGGTCCATCTCCTCGGCAGTCCAGAACGACGCCTCGGCCTTCTTGTACATCTGC 48781 Query 34128 CAGATGTCATGATATTGGATTGGGAA 34153 || || || || || |||| ||||| Sbjct 48780 CAAATCTCGTGGTAGCGGATCGGGAA 48755 Score = 116 bits (128), Expect = 5e-21 Identities = 586/926 (63%), Gaps = 6/926 (1%) Strand=Plus/Plus Query 63222 GGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAG 63281 || || ||| | || ||||||| |||||| || |||| | || || || ||| || Sbjct 36966 GGGCACTCAGCGGGGCACATCAGCGACCAGTCGCCGTTCTGCTCAACGCGGCGCATGAAC 37025 Query 63282 AGATCAGGAATCCAAAGAGCTATAAATAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTA 63341 | || |||| ||| || || | || || || | | | ||||| || || Sbjct 37026 AAGTCGGGAACCCACAGCGCCAGGAACAGGTCGCGCGCACGCACCTCCTCCTTACCATGG 37085 Query 63342 TTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCC 63401 ||||| ||||| | |||| | | | || || ||||| || |||| ||| || || Sbjct 37086 TTCTTGCGCAGATCAATGAACTCAAACACGTCCGAGTGCCATGGCTCCAGGTAAATCGCA 37145 Query 63402 ATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACT 63461 | | || || || ||||| || ||||| || | ||| | || ||||| || || || Sbjct 37146 AAGGCGCCGGGGCGCTTGTTGCCACCCTGGTCCACGTAGCGCGCTGTGTTGTTGTACACG 37205 Query 63462 CTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCCTCCACTG 63521 | | ||| || | ||||||||| | ||| || ||||||| || || || | Sbjct 37206 CGAAGCATGGGCACAATACCGTTGCTCACACCGTTCGTACCGGCAATGTACGAGCCCGTC 37265 Query 63522 GCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCAT 63581 || || || || || || || || || || ||| | || ||| | || || Sbjct 37266 GCGCGGATGTTGTGGATGTTCAGGCCAATACCACCGGCCGTCTTGCTGATCATCGCACA- 37324 Query 63582 CGTTTTAA-CGTGTCATAGATGCCTTCTATGCTATCATCGATCATGTTAAGTAGAAAACA 63640 ||| |||| ||||||||| || || || || || || ||||| | | || || || Sbjct 37325 CGTCTTAAGCGTGTCATAAATACCCTCAATCGAGTCGTCCTTCATGCTCACAAGGAAGCA 37384 Query 63641 GCTAGACATTTGGTGACGAGTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAA 63700 | ||||||||| | | || || ||||| || | ||| || || ||||||||||| Sbjct 37385 GGACGACATTTGGGGGTTGGGCGTGCCAGCATTGAACAGGGTCGGCGACGCGTGCGTAAA 37444 Query 63701 CCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAAT 63760 || || || | | ||||||||||| || || | | |||| || || Sbjct 37445 GGCCTTCTCGGACATGAAGTTGTACGTCTCGATCGCGCTCTTCACATCCTCGCCGTGGAT 37504 Query 63761 TCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACAATTTTGTTGTTTATTTT 63820 || | ||||||||||| | ||||||||| || | || | | ||| ||| || Sbjct 37505 GCCCATAGCGACACGCATAAGCATGTGCTGGGGGCGCTCCGCGACCTTGCCGTTGATCCG 37564 Query 63821 CAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTC 63880 | || |||||| |||| || || || ||||| ||||||| |||||| || || Sbjct 37565 TAGCAGGTAGGAACGCTCCAGCGTCTTGAAGCCAAAGAAGTTGTAGTGAAAGTCGCGCTC 37624 Query 63881 GTAAATAATAACCGAATTGAGCTTATCCTTATATTTGTTAACTATATCCATGGTAATACT 63940 ||| || | |||| | |||| | || | || | || || || | || Sbjct 37625 GTAGATGACGGCCGAGTCGAGCGTGTCGCGGTTCTTCATCACGGCCTCGTACGT-CTCCT 37683 Query 63941 T-GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCA 63999 | || || || || ||||||| | || || || ||||||| | | | || | || Sbjct 37684 TGGAGATCATAGGGCTGTGTTTCCTCGTCTTGGGGTTCACATAGTCGTACAGGTCTTGCA 37743 Query 64000 TCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATATGGCTATTCTGGCGG 64059 ||| | ||||| | || || ||||||||||| || || || || || | || | Sbjct 37744 CCACATGGCTAAAGTGCTTCTTGGTTTCCTTGTGCAGGTTGCTGATTGCGATACGCGCCG 37803 Query 64060 CTAGAATGGCATAATCCGGATGTTGTGTAGTACAAGT-GGCTGCTATTTCGGCTGCCAGA 64118 | || | ||| || || || || ||||| | || || || | || || || ||| Sbjct 37804 CGAGCACGGCGTAGTCTGGGTGGGTGGTAGT-CTTGTACGCCGCCGTCTCAGCCGCGAGA 37862 Query 64119 GTGTCCAATTCTACCGTTGTTACTCC 64144 |||||| ||| ||||| || || || Sbjct 37863 TTGTCCAGTTCGACCGTGGTCACACC 37888 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629817458291040