Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20dermatis_20[genbank_20GCA_5F001600775.1_202016-03-01] 18 sequences; 7,551,239 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq8 120 3e-22 seq6 86.0 6e-12 >seq8 Length=411764 Score = 120 bits (132), Expect = 3e-22 Identities = 161/224 (72%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 52837 GAGGCCGTCGACATTGAAAAAGAGTTTTTTACGGACGCTTTACCCGTATCATTGTTGGGC 52896 |||||||| | ||||| | || ||||| || ||||| | || || || || | ||| Sbjct 49394 GAGGCCGTGGCTATTGAGCAGGACTTTTTGACCGACGCCCTGCCTGTCTCGCTGATCGGC 49453 Query 52897 ATGAACGCGACCATGATGTGCGAGTACATCGAGTTTGTTGCGGACAGACTGTTGATGCAG 52956 |||||||| | | |||||| ||||||| |||||||| |||||| | ||| | | | Sbjct 49454 ATGAACGCCCGCCTCATGTGCCAGTACATTGAGTTTGTGGCGGACCGCCTGCTTGTCAAC 49513 Query 52957 CTCGGTCAGCCGAAATACTATAATGCGCGTAACCCCTTTTCGTTTATGAACAACATATCG 53016 ||||| | | || |||| || || ||||||||| |||||| | ||||| ||| Sbjct 49514 CTCGGCAACTCCAAGCACTACAACTCGGCGAACCCCTTTGACTTTATGGAGAACATTTCG 49573 Query 53017 CTCGAGGGCAAAACAAACTTTTTCGAGAGACGTGTGGGCGAGTA 53060 ||| ||||||| |||||||||| ||| | || || | ||| || Sbjct 49574 CTCCAGGGCAAGTCAAACTTTTTTGAGCGCCGCGTTGCCGACTA 49617 >seq6 Length=598762 Score = 86.0 bits (94), Expect = 6e-12 Identities = 136/195 (70%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 139573 CTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATA 139632 ||| || || ||||| || ||||||| |||| || || ||||| || || ||| | Sbjct 367032 CTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGACCATCCTCCAGCTGCTTGCCGGCAAA 366973 Query 139633 GATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTG 139692 |||||| || || || || || || || || || ||||| ||| || || | | Sbjct 366972 GATCAGGCGCTGTTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTGGCCTTGACATT 366913 Query 139693 TTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTAC 139752 || | ||||||| | ||||||||||| ||| | |||||| ||||| | || || || Sbjct 366912 CTCGATCGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTCCCGGTAAGGGTCTTGAC 366853 Query 139753 GAATATTTGCATAGC 139767 ||| | |||||| || Sbjct 366852 GAAGACTTGCATGGC 366838 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496063888385600