Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20dermatis_20[genbank_20GCA_5F001600775.1_202016-03-01] 18 sequences; 7,551,239 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq8 89.7 5e-13 >seq8 Length=411764 Score = 89.7 bits (98), Expect = 5e-13 Identities = 287/437 (66%), Gaps = 9/437 (2%) Strand=Plus/Plus Query 50422 GTGGCGTTTGCCATAGTTGAAGGTGTGtttttttCCGGTAGCTTTGCAGCCATATTTTAC 50481 || || |||||| || || ||| | ||||| || || || || |||| |||| Sbjct 49187 GTCGCTTTTGCCGCTGTCGAGGGTATCTTTTTCTCGGGCTCGTTCGCCTCCATCTTTTGG 49246 Query 50482 ATTAA-AACCTTAGGCATAATGCCCGGCCTCACGTTTAGCAACGAGTTGATTTCGCGCGA 50540 | || || | | ||| | ||||||||||| |||| |||||| | || ||||| || Sbjct 49247 CTCAAGAAACGT-GGCCTCATGCCCGGCCTGTCGTTCTCGAACGAGCTCATCTCGCGTGA 49305 Query 50541 CGAAGGAATGCACACAGACTTTGCGTGTTTGTACTACAATACGCGCGTAAATGAAAAATT 50600 ||| || ||||||||||||||||||| | | | || | | | || ||| Sbjct 49306 CGAGGGCCTGCACACAGACTTTGCGTGCCTCTTGTTCAGC---CACCTGAA-GAAGCGCG 49361 Query 50601 ATCATAC-GAAACAATTTTGGACATGTTCAAAGAAGCCGTCGACATCGAAAAAGAGTTTT 50659 || | || || | ||| ||| || ||||| | || || | || |||| Sbjct 49362 CGCACCCCGACACGGTGAACCGCATTATCACTGAGGCCGTGGCTATTGAGCAGGACTTTT 49421 Query 50660 TCACGGACGCTTTACCCGTGGCATTGTTGGGCATGAACGCAGACATGATGTGCGAGTACA 50719 | || ||||| | || || | || | ||||||||||| | | |||||| |||||| Sbjct 49422 TGACCGACGCCCTGCCTGTCTCGCTGATCGGCATGAACGCCCGCCTCATGTGCCAGTACA 49481 Query 50720 TTGAGTTTGTTGCAGACAGATTGTTGTTGCAGCTGGGACAAC-CGAAATACTATAATGCA 50778 |||||||||| || ||| | || | | | || || |||| | || |||| || | Sbjct 49482 TTGAGTTTGTGGCGGACCGCCTGCTTGTCAACCTCGG-CAACTCCAAGCACTACAACTCG 49540 Query 50779 CGTAACCCCTTTCCGTTTATGAATAACATATCGTTGGAGGGCAAAACAAACTTTTTCGAA 50838 ||||||||| |||||| | ||||| ||| | ||||||| |||||||||| || Sbjct 49541 GCGAACCCCTTTGACTTTATGGAGAACATTTCGCTCCAGGGCAAGTCAAACTTTTTTGAG 49600 Query 50839 AGACGTGTAGGCGAATA 50855 | || || | ||| || Sbjct 49601 CGCCGCGTTGCCGACTA 49617 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 507014285921760