Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20dermatis_20[genbank_20GCA_5F001600775.1_202016-03-01] 18 sequences; 7,551,239 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq8 131 2e-25 >seq8 Length=411764 Score = 131 bits (144), Expect = 2e-25 Identities = 441/684 (64%), Gaps = 2/684 (0%) Strand=Plus/Plus Query 63168 CCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATA 63227 || || || ||| | || ||||||| |||||| || |||| | || || || ||| Sbjct 36963 CCCGGGCACTCAGCGGGGCACATCAGCGACCAGTCGCCGTTCTGCTCAACGCGGCGCATG 37022 Query 63228 AAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCT 63287 || | || |||| ||| || || | || || || | | | ||||| || || Sbjct 37023 AACAAGTCGGGAACCCACAGCGCCAGGAACAGGTCGCGCGCACGCACCTCCTCCTTACCA 37082 Query 63288 GTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATG 63347 ||||| ||||| | |||| | | | || || ||||| || |||| ||| || Sbjct 37083 TGGTTCTTGCGCAGATCAATGAACTCAAACACGTCCGAGTGCCATGGCTCCAGGTAAATC 37142 Query 63348 GCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAA 63407 || | | || || || ||||| || ||||| || | ||| | || ||||| || || Sbjct 37143 GCAAAGGCGCCGGGGCGCTTGTTGCCACCCTGGTCCACGTAGCGCGCTGTGTTGTTGTAC 37202 Query 63408 ACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCTTCCA 63467 || | | ||| || | ||||||||| | ||| || ||||||| || || || Sbjct 37203 ACGCGAAGCATGGGCACAATACCGTTGCTCACACCGTTCGTACCGGCAATGTACGAGCCC 37262 Query 63468 CTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCG 63527 | || || || || || || || || || || ||| | || ||| | || Sbjct 37263 GTCGCGCGGATGTTGTGGATGTTCAGGCCAATACCACCGGCCGTCTTGCTGATCATCGCA 37322 Query 63528 CATCGTTTTAA-CGTGTCATAGATACCCTCTATGCTATCATCGATCATGTTAAGTAGAAA 63586 || ||| |||| ||||||||| |||||||| || || || ||||| | | || || Sbjct 37323 CA-CGTCTTAAGCGTGTCATAAATACCCTCAATCGAGTCGTCCTTCATGCTCACAAGGAA 37381 Query 63587 ACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGT 63646 ||| ||||||||| | || || ||||| || | ||| || || |||||||| Sbjct 37382 GCAGGACGACATTTGGGGGTTGGGCGTGCCAGCATTGAACAGGGTCGGCGACGCGTGCGT 37441 Query 63647 AAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATG 63706 ||| || || || | | ||||||||||| || || | | |||| || Sbjct 37442 AAAGGCCTTCTCGGACATGAAGTTGTACGTCTCGATCGCGCTCTTCACATCCTCGCCGTG 37501 Query 63707 AATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTAT 63766 || || | ||||||||||| | ||||||||| || | || ||| |||| ||| || Sbjct 37502 GATGCCCATAGCGACACGCATAAGCATGTGCTGGGGGCGCTCCGCGACCTTGCCGTTGAT 37561 Query 63767 TTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCG 63826 | || |||||| |||| || || || ||||| ||||||| |||||| || Sbjct 37562 CCGTAGCAGGTAGGAACGCTCCAGCGTCTTGAAGCCAAAGAAGTTGTAGTGAAAGTCGCG 37621 Query 63827 TTCGTAAATAATAACCGAGTTGAG 63850 ||||| || | |||||| ||| Sbjct 37622 CTCGTAGATGACGGCCGAGTCGAG 37645 Score = 113 bits (124), Expect = 6e-20 Identities = 166/232 (72%), Gaps = 5/232 (2%) Strand=Plus/Minus Query 33318 GTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCC 33377 |||||| |||||||| | || || ||||| || |||| || |||||||| ||||| Sbjct 49318 GTGCAGGCCCTCGTCACGCGAGATGAGCTCGTTCGAGAACGACAGGCCGGGCATGAGGCC 49259 Query 33378 ACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTCTACTGC 33437 ||| || || |||||||| ||||| ||||| || || || || ||||| || || || || Sbjct 49258 ACGTTTCTTGAGCCAAAAGATGGAGGCGAACGAGCCCGAGAAAAAGATACCCTCGACAGC 49199 Query 33438 AGCAAAGGCAATAAGTCTCTCTCCATAACC-GGCGC---TGTCATGTATCCACTTTTGAG 33493 ||||| || | || | ||| | | ||| ||||| |||| ||||| | | Sbjct 49198 GGCAAAAGCGACCAGGCGCTC-CGAGAACGAGGCGCGCTTGTCCGAGATCCAGCGCAGGG 49140 Query 33494 CCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAG 33545 |||| |||||||| | || || ||| || || || |||||||||||||| Sbjct 49139 CCCACTCGGCCTTTTGCTTGACGACAGGGATAGTCTCGATGGCATTAAAGAG 49088 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622947059836880